RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IGLC2P0DOY2 106 aa18.98■□□□□ 0.63
PABPN1-202ENST00000397276 IGLC3P0DOY3 106 aa18.98■□□□□ 0.63
PABPN1-202ENST00000397276 CX3CL1P78423 397 aa18.98■□□□□ 0.63
PABPN1-202ENST00000397276 THAP8Q8NA92 274 aa18.98■□□□□ 0.63
PABPN1-202ENST00000397276 CRYGBP07316 175 aa18.97■□□□□ 0.63
PABPN1-202ENST00000397276 SGK494Q96LW2 274 aa18.97■□□□□ 0.63
PABPN1-202ENST00000397276 CHODLQ9H9P2 273 aa18.97■□□□□ 0.63
PABPN1-202ENST00000397276 LY96Q9Y6Y9 160 aa18.97■□□□□ 0.63
PABPN1-202ENST00000397276 FAM168AQ92567 244 aa18.97■□□□□ 0.63
PABPN1-202ENST00000397276 KCNS1Q96KK3 526 aa18.97■□□□□ 0.63
PABPN1-202ENST00000397276 NHLH1Q02575 133 aa18.96■□□□□ 0.63
PABPN1-202ENST00000397276 LEMD1Q68G75 181 aa18.96■□□□□ 0.63
PABPN1-202ENST00000397276 CHD8Q9HCK8 2581 aa18.96■□□□□ 0.63
PABPN1-202ENST00000397276 H3BTX0 84 aa18.96■□□□□ 0.63
PABPN1-202ENST00000397276 UCNP55089 124 aa18.96■□□□□ 0.63
PABPN1-202ENST00000397276 SSBP3Q9BWW4 388 aaPredicted RBP18.96■□□□□ 0.63
PABPN1-202ENST00000397276 AMMECR1Q9Y4X0 333 aaPredicted RBP18.96■□□□□ 0.63
PABPN1-202ENST00000397276 IGLV2-8P01709 118 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 RAB1BQ9H0U4 201 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 SPTBN1Q01082 2364 aaKnown RBP18.95■□□□□ 0.62
PABPN1-202ENST00000397276 TIMM23O14925 209 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 GNG5P63218 68 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 KLRD1Q13241 179 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 CDC42EP3Q9UKI2 254 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 LAMTOR2Q9Y2Q5 125 aa18.95■□□□□ 0.62
PABPN1-202ENST00000397276 ZNF324O75467 553 aaPredicted RBP18.94■□□□□ 0.62
PABPN1-202ENST00000397276 LIPFP07098 398 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 HINT1P49773 126 aaPredicted RBP18.94■□□□□ 0.62
PABPN1-202ENST00000397276 ETFRF1Q6IPR1 90 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 RPH3ALQ9UNE2 315 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 CCL25O15444 150 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 FSTL3O95633 263 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 TSKUQ8WUA8 353 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 SRSF12Q8WXF0 261 aaKnown RBP18.94■□□□□ 0.62
PABPN1-202ENST00000397276 FXYD5Q96DB9 178 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 NCOR2Q9Y618 2525 aa18.94■□□□□ 0.62
PABPN1-202ENST00000397276 TEX22C9J3V5 150 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 HNRNPA3P51991 378 aaKnown RBP18.93■□□□□ 0.62
PABPN1-202ENST00000397276 IBA57Q5T440 356 aaKnown RBP18.93■□□□□ 0.62
PABPN1-202ENST00000397276 IGF2BP2-AS1Q96M15 143 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 UQCR10Q9UDW1 63 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 CNIH1O95406 144 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 SLAQ13239 276 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 C22orf15Q8WYQ4 148 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 CRYGCP07315 174 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 UNQ5815/PRO19632Q6UWF5 114 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 ZNF329Q86UD4 541 aa18.93■□□□□ 0.62
PABPN1-202ENST00000397276 TRBV9A0A0B4J1U6 114 aa18.92■□□□□ 0.62
PABPN1-202ENST00000397276 RNASE8Q8TDE3 154 aaKnown RBP18.92■□□□□ 0.62
PABPN1-202ENST00000397276 TP73-AS1Q9UF72 201 aa18.92■□□□□ 0.62
PABPN1-202ENST00000397276 OR10J3Q5JRS4 329 aa18.92■□□□□ 0.62
PABPN1-202ENST00000397276 MED13LQ71F56 2210 aa18.91■□□□□ 0.62
PABPN1-202ENST00000397276 LY6DQ14210 128 aa18.91■□□□□ 0.62
PABPN1-202ENST00000397276 PRR27Q6MZM9 219 aa18.91■□□□□ 0.62
PABPN1-202ENST00000397276 F11RQ9Y624 299 aaKnown RBP18.91■□□□□ 0.62
PABPN1-202ENST00000397276 TIMD4Q96H15 378 aa18.91■□□□□ 0.62
PABPN1-202ENST00000397276 LY6LH3BQJ8 138 aa18.9■□□□□ 0.62
PABPN1-202ENST00000397276 ISLRO14498 428 aa18.9■□□□□ 0.62
PABPN1-202ENST00000397276 TMEM116Q8NCL8 245 aa18.9■□□□□ 0.62
PABPN1-202ENST00000397276 PERPQ96FX8 193 aa18.9■□□□□ 0.62
PABPN1-202ENST00000397276 HTR1DP28221 377 aa18.9■□□□□ 0.62
PABPN1-202ENST00000397276 WDR73Q6P4I2 378 aa18.9■□□□□ 0.62
PABPN1-202ENST00000397276 PEX7O00628 323 aa18.89■□□□□ 0.62
PABPN1-202ENST00000397276 C8orf46Q8TAG6 207 aa18.89■□□□□ 0.62
PABPN1-202ENST00000397276 OSTCQ9NRP0 149 aa18.89■□□□□ 0.62
PABPN1-202ENST00000397276 PGPA6NDG6 321 aa18.89■□□□□ 0.61
PABPN1-202ENST00000397276 MT-ND6P03923 174 aa18.89■□□□□ 0.61
PABPN1-202ENST00000397276 AMY1AP04745 511 aa18.89■□□□□ 0.61
PABPN1-202ENST00000397276 TRGV9Q99603 122 aa18.89■□□□□ 0.61
PABPN1-202ENST00000397276 PTTG1IPP53801 180 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 HES1Q14469 280 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 FBLN7Q53RD9 439 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 LY6G5BQ8NDX9 201 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 C20orf202A1L168 122 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 APCSP02743 223 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 RBP4P02753 201 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 SLC25A5P05141 298 aaKnown RBP18.88■□□□□ 0.61
PABPN1-202ENST00000397276 LYZP61626 148 aa18.88■□□□□ 0.61
PABPN1-202ENST00000397276 GPR6P46095 362 aaPredicted RBP18.87■□□□□ 0.61
PABPN1-202ENST00000397276 C18orf32Q8TCD1 76 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 S4R3C0 116 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 LOC105371242A0A075B767 164 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 NDUFS7O75251 213 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 PSG1P11464 419 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 GDF5OSQ5U4N7 250 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 DPM3Q9P2X0 92 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 NBEAP1P0C6P0 100 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 PRB4P10163 310 aaPredicted RBP18.87■□□□□ 0.61
PABPN1-202ENST00000397276 TSPOP30536 169 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 PVRIGQ6DKI7 326 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 ERASQ7Z444 233 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 BORCS7Q96B45 105 aa18.87■□□□□ 0.61
PABPN1-202ENST00000397276 SMIM27A0A1W2PRY6 76 aa18.86■□□□□ 0.61
PABPN1-202ENST00000397276 KLF17Q5JT82 389 aaPredicted RBP18.86■□□□□ 0.61
PABPN1-202ENST00000397276 SSBP4Q9BWG4 385 aaPredicted RBP18.86■□□□□ 0.61
PABPN1-202ENST00000397276 Q56UQ5 140 aa18.86■□□□□ 0.61
PABPN1-202ENST00000397276 KIR3DL3Q8N743 410 aa18.86■□□□□ 0.61
PABPN1-202ENST00000397276 CORTO00230 105 aa18.85■□□□□ 0.61
PABPN1-202ENST00000397276 EBLN2Q6P2I7 272 aa18.85■□□□□ 0.61
PABPN1-202ENST00000397276 A0A1W2PPR1 153 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms