RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 AKR1C2P52895 323 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 RBM11P57052 281 aaKnown RBP3.33□□□□□ -1.88
GABPB1-204ENST00000396464 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 FAAP20Q6NZ36 180 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 GLIPR1L1Q6UWM5 242 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 LINC00305Q7Z4B0 112 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 MSRB3Q8IXL7 192 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 C3orf22Q8N5N4 141 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 LINC01560Q8TB33 94 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 WFDC5Q8TCV5 224 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 TCEAL2Q9H3H9 227 aaPredicted RBP3.33□□□□□ -1.88
GABPB1-204ENST00000396464 CST9LQ9H4G1 147 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 ZNRD1Q9P1U0 126 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 LINC00588Q9Y4M8 146 aa3.33□□□□□ -1.88
GABPB1-204ENST00000396464 TNS1Q9HBL0 1735 aaKnown RBP3.33□□□□□ -1.88
GABPB1-204ENST00000396464 UBR2Q8IWV8 1755 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 NUP210Q8TEM1 1887 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-204ENST00000396464 ANKRD12Q6UB98 2062 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 TJP1Q07157 1748 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 IGHV1-58A0A0C4DH39 117 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 TRBV7-6A0A0J9YX20 115 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 A0A1B0GVG6 124 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 IRGMA1A4Y4 181 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 FAM168BA1KXE4 195 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 A8MWP4 228 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 LEUTXA8MZ59 168 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 LEPROTO15243 131 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 CST7O76096 145 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 IGHV1-46P01743 117 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 CXCL1P09341 107 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 NPPCP23582 126 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 NDUFA6P56556 154 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 BCL2L15Q5TBC7 163 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 CD177Q8N6Q3 437 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-204ENST00000396464 OR8D4Q8NGM9 314 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 HIST1H2BAQ96A08 127 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 SLC25A46Q96AG3 418 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 NAA38Q9BRA0 125 aaKnown RBP3.32□□□□□ -1.88
GABPB1-204ENST00000396464 C11orf1Q9H5F2 150 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 SCN3BQ9NY72 215 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 MRC1P22897 1456 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 DOCK4Q8N1I0 1966 aa3.32□□□□□ -1.88
GABPB1-204ENST00000396464 KIF26BQ2KJY2 2108 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 SVILO95425 2214 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 IGKV1-9A0A0C4DH69 117 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 GGT3PA6NGU5 568 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 TMEM212A6NML5 194 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 IGKV1D-33P01593 117 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 IGKV1-33P01594 117 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF728P0DKX0 622 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 CCL3P10147 92 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 HLA-EP13747 358 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 SRP14P37108 136 aaKnown RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 TMBIM6P55061 237 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 TAS2R20P59543 309 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 PPP3R1P63098 170 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 EIF5AP63241 154 aaKnown RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 MEF2BQ02080 365 aaPredicted RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 RELAQ04206 551 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 RPL18Q07020 188 aaKnown RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 ZNF767PQ75MW2 155 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 TEX29Q8N6K0 151 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 OR4S1Q8NGB4 309 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 RBPMSQ93062 196 aaKnown RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 MRPL32Q9BYC8 188 aaKnown RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 SLC39A9Q9NUM3 307 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 SNX12Q9UMY4 172 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 TMEM14AQ9Y6G1 99 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 ADAMTS7Q9UKP4 1686 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 ARFGEF2Q9Y6D5 1785 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 DSCAMO60469 2012 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 LY75O60449 1722 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 C4BP0C0L5 1744 aa3.31□□□□□ -1.88
GABPB1-204ENST00000396464 COL5A3P25940 1745 aaPredicted RBP3.31□□□□□ -1.88
GABPB1-204ENST00000396464 RGPD3A6NKT7 1758 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-204ENST00000396464 ANKRD36CQ5JPF3 1778 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 RGPD4Q7Z3J3 1758 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 EP400Q96L91 3159 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 IGLV3-10A0A075B6K4 115 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 H3BMG7 143 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 HLA-DMBP28068 263 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 RPL27AP46776 148 aaKnown RBP3.3□□□□□ -1.88
GABPB1-204ENST00000396464 GNB2P62879 340 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 C16orf47Q6ZP98 133 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-204ENST00000396464 PHF5AQ7RTV0 110 aaKnown RBP3.3□□□□□ -1.88
GABPB1-204ENST00000396464 IFT20Q8IY31 132 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 TERB2Q8NHR7 220 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 PSMG3Q9BT73 122 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-204ENST00000396464 LINC00574Q9H8X3 128 aa3.3□□□□□ -1.88
GABPB1-204ENST00000396464 MCTS1Q9ULC4 181 aaKnown RBP3.3□□□□□ -1.88
GABPB1-204ENST00000396464 ZFP30Q9Y2G7 519 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms