RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SDC2P34741 201 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF93P35789 620 aaPredicted RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 GUCA1AP43080 201 aaPredicted RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 AQP4P55087 323 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 FOXA1P55317 472 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TPPP2P59282 170 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 QRFPP83859 136 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 HOXC5Q00444 222 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 MYL5Q02045 173 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 CATR1Q13166 79 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 DIAPH2-AS1Q14236 149 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ORMDL2Q53FV1 153 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 Q5BKY6 102 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 CLLU1Q5K131 121 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SPANXN3Q5MJ09 141 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 AMTNQ6UX39 209 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 PHF5AQ7RTV0 110 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 LINC00305Q7Z4B0 112 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TRAPPC6BQ86SZ2 158 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 MDP1Q86V88 176 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 RPS19BP1Q86WX3 136 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 GPHB5Q86YW7 130 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TTC9CQ8N5M4 171 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 LINC00311Q8N616 119 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 PACRGLQ8N7B6 248 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF645Q8N7E2 425 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ST20-AS1Q8NBB2 130 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 OR1J4Q8NGS1 313 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 OR10AC1Q8NH08 325 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 STAG3L4Q8TBR4 150 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 FAM57AQ8TBR7 257 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 RAB2BQ8WUD1 216 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 H1FXQ92522 213 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SLC25A46Q96AG3 418 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 MIEN1Q9BRT3 115 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TSSK6Q9BXA6 273 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SPANXDQ9BXN6 97 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 REG4Q9BYZ8 158 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 RERGLQ9H628 205 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 C16orf95Q9H693 158 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TUBA4BQ9H853 241 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 CCDC167Q9P0B6 97 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 CKLFQ9UBR5 152 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 TP73-AS1Q9UF72 201 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 FUT9Q9Y231 359 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF443Q9Y2A4 671 aaPredicted RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 MRPS16Q9Y3D3 137 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 KTN1Q86UP2 1357 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 DSCAMO60469 2012 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 A2ML1A8K2U0 1454 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 IFT140Q96RY7 1462 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 SYNJ1O43426 1573 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 DIDO1Q9BTC0 2240 aaKnown RBP1.16□□□□□ -2.22
TRAV40-201ENST00000390467 THSD7AQ9UPZ6 1657 aa1.16□□□□□ -2.22
TRAV40-201ENST00000390467 MYO9BQ13459 2157 aa1.15□□□□□ -2.22
TRAV40-201ENST00000390467 NSD3Q9BZ95 1437 aa1.15□□□□□ -2.22
TRAV40-201ENST00000390467 SIGLEC1Q9BZZ2 1709 aa1.15□□□□□ -2.22
TRAV40-201ENST00000390467 MYH7BA7E2Y1 1941 aa1.15□□□□□ -2.22
TRAV40-201ENST00000390467 DENND4CQ5VZ89 1909 aa1.15□□□□□ -2.22
TRAV40-201ENST00000390467 ANAPC1Q9H1A4 1944 aa1.15□□□□□ -2.22
TRAV40-201ENST00000390467 IGHV3OR16-8A0A075B7F1 116 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 TRAV13-1A0A0B4J241 112 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 IRGMA1A4Y4 181 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 ODAMA1E959 279 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF860A6NHJ4 632 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 C9JCJ5 164 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 PLA2G10O15496 165 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 SOCS1O15524 211 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 MRPS14O60783 128 aaKnown RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 KLF7O75840 302 aaPredicted RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 CST7O76096 145 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 NAPSAO96009 420 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 SRP19P09132 144 aaKnown RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 IGLC1P0CG04 106 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 ETV6P41212 452 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF83P51522 516 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 AKR1C2P52895 323 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 FGF12P61328 243 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 UBA52P62987 128 aaKnown RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 CCL20P78556 96 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 DCDP81605 110 aaKnown RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 HES1Q14469 280 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 FAM74A1Q5RGS3 127 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 LAIR2Q6ISS4 152 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 C22orf39Q6P5X5 142 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 SSX8Q7RTT4 187 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 SCXQ7RTU7 201 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 LINC00471Q8N535 108 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 TEX29Q8N6K0 151 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 SLC25A29Q8N8R3 303 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 APCDD1LQ8NCL9 501 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 C1orf64Q8NEQ6 169 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 OR8D4Q8NGM9 314 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 OR5H2Q8NGV7 314 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 OR4K13Q8NH42 304 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 BRK1Q8WUW1 75 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 RNASE6Q93091 150 aaKnown RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 LINC00052Q96N35 136 aa1.15□□□□□ -2.23
TRAV40-201ENST00000390467 CIB3Q96Q77 187 aaPredicted RBP1.15□□□□□ -2.23
TRAV40-201ENST00000390467 TIMM17AQ99595 171 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms