RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 SLC25A5P05141 298 aaKnown RBP11.78□□□□□ -0.52
SNX2-201ENST00000379516 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
SNX2-201ENST00000379516 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
SNX2-201ENST00000379516 MAPK1IP1LQ8NDC0 245 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 TMEM68Q96MH6 324 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 TMEM14CQ9P0S9 112 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 A0A096LNT2 108 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 H3BRN7 92 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 SCGB2A1O75556 95 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 AMY1AP04745 511 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 FCGR2BP31994 310 aaPredicted RBP11.77□□□□□ -0.52
SNX2-201ENST00000379516 GNG5P63218 68 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 RHOGP84095 191 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.52
SNX2-201ENST00000379516 C15orf32Q32M92 178 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 VN1R17PQ8TDU5 208 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 EPDR1Q9UM22 224 aa11.77□□□□□ -0.52
SNX2-201ENST00000379516 H3BUX3 64 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 TGOLN2O43493 480 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 TAS2R60P59551 318 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 ERVFC1-1P60608 527 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 C9orf152Q5JTZ5 239 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 BPIFA4PQ86YQ2 179 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 TXN2Q99757 166 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 CDC42EP3Q9UKI2 254 aa11.77□□□□□ -0.53
SNX2-201ENST00000379516 TRAV34A0A0B4J273 112 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 C5orf52A6NGY3 159 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 PPP5D1E7EU14 171 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 GGCTO75223 188 aaKnown RBP11.76□□□□□ -0.53
SNX2-201ENST00000379516 CTSGP08311 255 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
SNX2-201ENST00000379516 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
SNX2-201ENST00000379516 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
SNX2-201ENST00000379516 MS4A10Q96PG2 267 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 Q9H3A6 140 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 SRD5A3Q9H8P0 318 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 ZNF586Q9NXT0 402 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 RPH3ALQ9UNE2 315 aa11.76□□□□□ -0.53
SNX2-201ENST00000379516 CELSR1Q9NYQ6 3014 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 TRBV9A0A0B4J1U6 114 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 IGLV2-8P01709 118 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 S100A7AQ86SG5 101 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 CHRDL1Q9BU40 450 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 LINC00527Q9UJ94 153 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 ZNF98A6NK75 572 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 SLC17A3O00476 420 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 TGFAP01135 160 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 GPR183P32249 361 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 AKR1D1P51857 326 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 FOXL1Q12952 345 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 KLK9Q2XQG4 91 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 OR4F17Q8NGA8 305 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 ZNF502Q8TBZ5 544 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 KLK9Q9UKQ9 250 aa11.75□□□□□ -0.53
SNX2-201ENST00000379516 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 ADMP35318 185 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
SNX2-201ENST00000379516 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
SNX2-201ENST00000379516 CENPEQ02224 2701 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 A6NDX4 124 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 AP4M1O00189 453 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 ISLRO14498 428 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 GCGP01275 180 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 CLEC3BP05452 202 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 UBE2G1P62253 170 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 FABP9Q0Z7S8 132 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 FRZBQ92765 325 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 POLQO75417 2590 aa11.74□□□□□ -0.53
SNX2-201ENST00000379516 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 ATG101Q9BSB4 218 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 OTORQ9NRC9 128 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 IL36BQ9NZH7 164 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 RNF24Q9Y225 148 aa11.73□□□□□ -0.53
SNX2-201ENST00000379516 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 ZNF320A2RRD8 509 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
SNX2-201ENST00000379516 NDUFA6P56556 154 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms