RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OR4A47Q6IF82 309 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 RASL11AQ6T310 242 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 SLC25A48Q6ZT89 311 aaKnown RBP8.23□□□□□ -1.09
COL5A1-202ENST00000371820 DYNAPQ8N1N2 210 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 NECAP1Q8NC96 275 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 OR9G1Q8NH87 305 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 CT45A3Q8NHU0 189 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PIFOQ8TCI5 191 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 GNB1LQ9BYB4 327 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 SLC35D1Q9NTN3 355 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 M0QZK8 103 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 MMP23AO75900 390 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 CA2P00918 260 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 IGLV1-47P01700 117 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 GZMBP10144 247 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 ESDP10768 282 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 NPPCP23582 126 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 IL3RAP26951 378 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 Q0VG73 95 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 LTC4SQ16873 150 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 MIC13Q5XKP0 118 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 LYG1Q8N1E2 194 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 Q8N2B8 174 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 GBGT1Q8N5D6 347 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 LINC00311Q8N616 119 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 STPG3Q8N7X2 389 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 ZNF439Q8NDP4 499 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 SMIM12Q96EX1 92 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 COMMD5Q9GZQ3 224 aa8.22□□□□□ -1.09
COL5A1-202ENST00000371820 KIAA2026Q5HYC2 2103 aa8.21□□□□□ -1.09
COL5A1-202ENST00000371820 BUB1B-PAK6H3BSN5 160 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 ISLRO14498 428 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 OR5G3P0C626 314 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 C8orf88P0DMB2 117 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 GNG4P50150 75 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF134P52741 427 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 UBE2G2P60604 165 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 GAMTQ14353 236 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 TMEM177Q53S58 311 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 LDLRAD2Q5SZI1 272 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 TPTE2P1Q5T6R2 138 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 TEX38Q6PEX7 206 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 TMEM219Q86XT9 240 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 KLHDC1Q8N7A1 406 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 OCC1Q8TAD7 63 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 RPEQ96AT9 228 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 RBM14Q96PK6 669 aaKnown RBP8.21□□□□□ -1.1
COL5A1-202ENST00000371820 NABP2Q9BQ15 211 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF702PQ9H963 129 aa8.21□□□□□ -1.1
COL5A1-202ENST00000371820 SAA2-SAA4A0A096LPE2 208 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 TEX50A0A1B0GTY4 177 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF705GA8MUZ8 300 aaPredicted RBP8.2□□□□□ -1.1
COL5A1-202ENST00000371820 A8MWP6 167 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 REG1AP05451 166 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 SAA2P0DJI9 122 aaPredicted RBP8.2□□□□□ -1.1
COL5A1-202ENST00000371820 CRISP2P16562 243 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 LGALS7P47929 136 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 ATP5G3P48201 142 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 CD69Q07108 199 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 RPL39P5Q59GN2 51 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 OR10J3Q5JRS4 329 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF833PQ6ZTB9 187 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 PDPNQ86YL7 162 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 FLYWCH2Q96CP2 140 aaKnown RBP8.2□□□□□ -1.1
COL5A1-202ENST00000371820 EAF1Q96JC9 268 aaPredicted RBP8.2□□□□□ -1.1
COL5A1-202ENST00000371820 C2orf88Q9BSF0 95 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 SLC25A33Q9BSK2 321 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 NDUFAF3Q9BU61 184 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 DNAJC4Q9NNZ3 241 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 SIGLEC9Q9Y336 463 aa8.2□□□□□ -1.1
COL5A1-202ENST00000371820 CORTO00230 105 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 LINC00869P0C866 280 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 RAB4AP20338 218 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 ERVFC1-1P60608 527 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 SPINK9Q5DT21 86 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 OR5T1Q8NG75 326 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 OR10X1Q8NGY0 326 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 TMEM167AQ8TBQ9 72 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 CFHR4Q92496 578 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 C14orf144Q96I85 54 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 MS4A10Q96PG2 267 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 RNF24Q9Y225 148 aa8.19□□□□□ -1.1
COL5A1-202ENST00000371820 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
COL5A1-202ENST00000371820 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 HLA-DQA1P01909 254 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 CT45A6P0DMU7 189 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 CT45A5P0DMU8 189 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 CT45A7P0DMV0 189 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 GNG10P50151 68 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 RPL8P62917 257 aaKnown RBP8.18□□□□□ -1.1
COL5A1-202ENST00000371820 PSG5Q15238 335 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 C9orf152Q5JTZ5 239 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 C1orf194Q5T5A4 169 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms