RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 MGAT4CQ9UBM8 478 aa17.58■□□□□ 0.4
PFDN2-201ENST00000368010 SLC45A2Q9UMX9 530 aa17.58■□□□□ 0.4
PFDN2-201ENST00000368010 LSM5Q9Y4Y9 91 aaKnown RBP17.58■□□□□ 0.4
PFDN2-201ENST00000368010 FNDC10F2Z333 226 aa17.57■□□□□ 0.4
PFDN2-201ENST00000368010 CA1P00915 261 aaPredicted RBP17.57■□□□□ 0.4
PFDN2-201ENST00000368010 GATA2P23769 480 aaPredicted RBP17.57■□□□□ 0.4
PFDN2-201ENST00000368010 GSG1LQ6UXU4 331 aa17.57■□□□□ 0.4
PFDN2-201ENST00000368010 CYP2G1PQ6ZSU1 146 aa17.57■□□□□ 0.4
PFDN2-201ENST00000368010 GPN1Q9HCN4 374 aaPredicted RBP17.57■□□□□ 0.4
PFDN2-201ENST00000368010 KNCNA6PVL3 124 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 K7EPK0 472 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 ORM2P19652 201 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 S100A7P31151 101 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 TMEM182Q6ZP80 229 aaPredicted RBP17.56■□□□□ 0.4
PFDN2-201ENST00000368010 TRPT1Q86TN4 253 aaKnown RBP17.56■□□□□ 0.4
PFDN2-201ENST00000368010 OR8I2Q8N0Y5 310 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 GATAD1Q8WUU5 269 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 TMEM147Q9BVK8 224 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 NPVFQ9HCQ7 196 aa17.56■□□□□ 0.4
PFDN2-201ENST00000368010 ACTL10Q5JWF8 245 aa17.55■□□□□ 0.4
PFDN2-201ENST00000368010 A0A0J9YWU9 116 aa17.54■□□□□ 0.4
PFDN2-201ENST00000368010 PVALBP20472 110 aaPredicted RBP17.54■□□□□ 0.4
PFDN2-201ENST00000368010 BCAP31P51572 246 aa17.54■□□□□ 0.4
PFDN2-201ENST00000368010 SELENOTP62341 195 aa17.54■□□□□ 0.4
PFDN2-201ENST00000368010 NRARPQ7Z6K4 114 aa17.54■□□□□ 0.4
PFDN2-201ENST00000368010 OR1B1Q8NGR6 318 aa17.54■□□□□ 0.4
PFDN2-201ENST00000368010 GGACTQ9BVM4 153 aa17.54■□□□□ 0.4
PFDN2-201ENST00000368010 SPP1P10451 314 aa17.53■□□□□ 0.4
PFDN2-201ENST00000368010 CAV2P51636 162 aa17.53■□□□□ 0.4
PFDN2-201ENST00000368010 DEFA1P59665 94 aa17.53■□□□□ 0.4
PFDN2-201ENST00000368010 DEFA3P59666 94 aa17.53■□□□□ 0.4
PFDN2-201ENST00000368010 S100A10P60903 97 aa17.53■□□□□ 0.4
PFDN2-201ENST00000368010 MORN3Q6PF18 240 aaPredicted RBP17.53■□□□□ 0.4
PFDN2-201ENST00000368010 SLC25A22Q9H936 323 aa17.53■□□□□ 0.4
PFDN2-201ENST00000368010 ZNF98A6NK75 572 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 PRAF2O60831 178 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 LINC00869P0C866 280 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 ID1P41134 155 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 ARL16Q0P5N6 197 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 TEPPQ6URK8 271 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 RARRES2Q99969 163 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 DOK5Q9P104 306 aa17.52■□□□□ 0.4
PFDN2-201ENST00000368010 INMT-MINDY4F8WBC2 141 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 DEDDO75618 318 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 GALR1P47211 349 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 RAP2BP61225 183 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 TMEM41BQ5BJD5 291 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 SAMD13Q5VXD3 122 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 SLC25A32Q9H2D1 315 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 C11orf1Q9H5F2 150 aa17.51■□□□□ 0.39
PFDN2-201ENST00000368010 PSMB3P49720 205 aa17.5■□□□□ 0.39
PFDN2-201ENST00000368010 SLC38A11Q08AI6 406 aa17.5■□□□□ 0.39
PFDN2-201ENST00000368010 IL15RAQ13261 267 aa17.5■□□□□ 0.39
PFDN2-201ENST00000368010 RAB32Q13637 225 aa17.5■□□□□ 0.39
PFDN2-201ENST00000368010 TMEM217Q8N7C4 229 aa17.5■□□□□ 0.39
PFDN2-201ENST00000368010 FAM24AA6NFZ4 105 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 SOCS3O14543 225 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 HYPMO75409 117 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 MEOX2P50222 304 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 PLP1P60201 277 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 ZNF546Q86UE3 836 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 OR11H2Q8NH07 326 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 LINC00052Q96N35 136 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 GPR82Q96P67 336 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 HIGD1AQ9Y241 93 aa17.49■□□□□ 0.39
PFDN2-201ENST00000368010 H3BRN7 92 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 GOSR2O14653 212 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 OR5G3P0C626 314 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 S100A7AQ86SG5 101 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 MARVELD1Q9BSK0 173 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 SHANK2-AS3Q9BTD1 123 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 SCRT1Q9BWW7 348 aa17.48■□□□□ 0.39
PFDN2-201ENST00000368010 SLC25A39Q9BZJ4 359 aaPredicted RBP17.48■□□□□ 0.39
PFDN2-201ENST00000368010 LYRM2Q9NU23 88 aaPredicted RBP17.48■□□□□ 0.39
PFDN2-201ENST00000368010 ISLRO14498 428 aa17.47■□□□□ 0.39
PFDN2-201ENST00000368010 CST7O76096 145 aa17.47■□□□□ 0.39
PFDN2-201ENST00000368010 GIG44P09565 113 aaPredicted RBP17.47■□□□□ 0.39
PFDN2-201ENST00000368010 ATF4P18848 351 aaPredicted RBP17.47■□□□□ 0.39
PFDN2-201ENST00000368010 C4BPBP20851 252 aa17.47■□□□□ 0.39
PFDN2-201ENST00000368010 RSG1Q9BU20 258 aa17.47■□□□□ 0.39
PFDN2-201ENST00000368010 H3BMM0 161 aa17.46■□□□□ 0.39
PFDN2-201ENST00000368010 AGPAT2O15120 278 aa17.46■□□□□ 0.39
PFDN2-201ENST00000368010 HLA-DRB4P13762 266 aa17.46■□□□□ 0.39
PFDN2-201ENST00000368010 NUTF2P61970 127 aaKnown RBP17.46■□□□□ 0.39
PFDN2-201ENST00000368010 EWSR1Q01844 656 aaKnown RBP eCLIP17.46■□□□□ 0.39
PFDN2-201ENST00000368010 C16orf92Q96LL3 132 aa17.46■□□□□ 0.39
PFDN2-201ENST00000368010 ARL6Q9H0F7 186 aa17.46■□□□□ 0.39
PFDN2-201ENST00000368010 HLA-DRB4X5D2U9 266 aa17.46■□□□□ 0.39
PFDN2-201ENST00000368010 STARD9Q9P2P6 4700 aa17.46■□□□□ 0.38
PFDN2-201ENST00000368010 SULT1A1P50225 295 aa17.45■□□□□ 0.38
PFDN2-201ENST00000368010 PXDC1Q5TGL8 231 aa17.45■□□□□ 0.38
PFDN2-201ENST00000368010 FOXI2Q6ZQN5 318 aa17.45■□□□□ 0.38
PFDN2-201ENST00000368010 STX12Q86Y82 276 aa17.45■□□□□ 0.38
PFDN2-201ENST00000368010 TMEM252Q8N6L7 170 aa17.45■□□□□ 0.38
PFDN2-201ENST00000368010 SIX6O95475 246 aa17.44■□□□□ 0.38
PFDN2-201ENST00000368010 RPL7P18124 248 aaKnown RBP17.44■□□□□ 0.38
PFDN2-201ENST00000368010 RAB31Q13636 194 aa17.44■□□□□ 0.38
PFDN2-201ENST00000368010 UHRF2Q96PU4 802 aa17.44■□□□□ 0.38
PFDN2-201ENST00000368010 MGST2Q99735 147 aa17.44■□□□□ 0.38
PFDN2-201ENST00000368010 ARV1Q9H2C2 271 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms