RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C12orf54Q6X4T0 127 aa15.16■□□□□ 0.02
CLIP2-202ENST00000361545 TMEM183AQ8IXX5 376 aa15.16■□□□□ 0.02
CLIP2-202ENST00000361545 FAM215AQ9Y5M1 114 aa15.16■□□□□ 0.02
CLIP2-202ENST00000361545 SOX21Q9Y651 276 aaPredicted RBP15.16■□□□□ 0.02
CLIP2-202ENST00000361545 SPSB3Q6PJ21 355 aa15.15■□□□□ 0.02
CLIP2-202ENST00000361545 TRBV6-6A0A0A6YYG2 114 aa15.15■□□□□ 0.02
CLIP2-202ENST00000361545 PCNX2A6NKB5 2137 aa15.15■□□□□ 0.02
CLIP2-202ENST00000361545 ZNF524Q96C55 264 aa15.15■□□□□ 0.02
CLIP2-202ENST00000361545 FANCMQ8IYD8 2048 aa15.15■□□□□ 0.02
CLIP2-202ENST00000361545 A0A1B0GW15 77 aa15.14■□□□□ 0.02
CLIP2-202ENST00000361545 NMSQ5H8A3 153 aa15.14■□□□□ 0.02
CLIP2-202ENST00000361545 CARHSP1Q9Y2V2 147 aaKnown RBP15.14■□□□□ 0.02
CLIP2-202ENST00000361545 WT1P19544 449 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-202ENST00000361545 GFI1BQ5VTD9 330 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 COPS9Q8WXC6 57 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 ETV2O00321 342 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-202ENST00000361545 Q6ZR03 302 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 TCF23Q7RTU1 214 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 FAM19A2Q8N3H0 131 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 DOCK10Q96BY6 2186 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 LRRK1Q38SD2 2015 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 FXYD7P58549 80 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 SRSF3P84103 164 aaKnown RBP15.14■□□□□ 0.01
CLIP2-202ENST00000361545 ACTL10Q5JWF8 245 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 ST20Q9HBF5 79 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 TRBV7-1A0A0A6YYK4 115 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 ZNF503-AS2A6NEH8 195 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 OCC1Q8TAD7 63 aa15.14■□□□□ 0.01
CLIP2-202ENST00000361545 TRGV11A0A075B6L2 103 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 ATP5LO75964 103 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 CA1P00915 261 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-202ENST00000361545 TANC1Q9C0D5 1861 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 FABP2P12104 132 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 SEPSECSQ9HD40 501 aaKnown RBP15.13■□□□□ 0.01
CLIP2-202ENST00000361545 PTPRDP23468 1912 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 TSC2P49815 1807 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 K7EM74 188 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 MGST2Q99735 147 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 IGFL4Q6B9Z1 124 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 JKAMPQ9P055 326 aa15.13■□□□□ 0.01
CLIP2-202ENST00000361545 FCN3O75636 299 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 RIPPLY3P57055 190 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 DMRTA1Q5VZB9 504 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 PLXNA4Q9HCM2 1894 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 ZNF415Q09FC8 603 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 JOSD1Q15040 202 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-202ENST00000361545 DUX4L9Q6RFH8 374 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-202ENST00000361545 KIAA1671Q9BY89 1806 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 SNAI2O43623 268 aa15.12■□□□□ 0.01
CLIP2-202ENST00000361545 USMG5Q96IX5 58 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 MLANAQ16655 118 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 ERASQ7Z444 233 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-202ENST00000361545 H3BRM9 83 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 TRGV9Q99603 122 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 OVOL3O00110 214 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 NDUFA3O95167 84 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 UBE2E1P51965 193 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 SYNJ2BPP57105 145 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 CFAP161Q6P656 301 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 NLRC5Q86WI3 1866 aa15.11■□□□□ 0.01
CLIP2-202ENST00000361545 MALP21145 153 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 EVI2AP22794 236 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 CTAG1AP78358 180 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 CR1LQ2VPA4 569 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 SRRM4A7MD48 611 aaKnown RBP15.1■□□□□ 0.01
CLIP2-202ENST00000361545 GZMBP10144 247 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 HOXA5P20719 270 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 NTF4P34130 210 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 RFNGQ9Y644 331 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 IGHV3-73A0A0B4J1V6 119 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 STAG3L3P0CL85 134 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 GATA3P23771 443 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 RHPN1-AS1Q9BWJ2 59 aa15.1■□□□□ 0.01
CLIP2-202ENST00000361545 CHCHD5Q9BSY4 110 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 PTPRQQ9UMZ3 2332 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 YLPM1P49750 1951 aaKnown RBP15.09■□□□□ 0.01
CLIP2-202ENST00000361545 UBE2E2Q96LR5 201 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 RNF114Q9Y508 228 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 TRAV12-3A0A0B4J271 114 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 ASCL4Q6XD76 172 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 VCX2Q9H322 139 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 PEF1Q9UBV8 284 aaKnown RBP15.09■□□□□ 0.01
CLIP2-202ENST00000361545 IGHV1-69DA0A0B4J2H0 117 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 A0A0G2JRQ6 117 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 IGHV1-69P01742 117 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 TMEM14EPQ6UXP3 125 aa15.09■□□□□ 0.01
CLIP2-202ENST00000361545 PRB1P04280 392 aa15.08■□□□□ 0.01
CLIP2-202ENST00000361545 IFI27P40305 119 aaPredicted RBP15.08■□□□□ 0.01
CLIP2-202ENST00000361545 CMC4P56277 68 aaPredicted RBP15.08■□□□□ 0.01
CLIP2-202ENST00000361545 OSTCQ9NRP0 149 aa15.08■□□□□ 0.01
CLIP2-202ENST00000361545 Q8TAT8 98 aa15.08■□□□□ 0
CLIP2-202ENST00000361545 CNTFRP26992 372 aa15.08■□□□□ 0
CLIP2-202ENST00000361545 C1QL4Q86Z23 238 aa15.08■□□□□ 0
CLIP2-202ENST00000361545 MRPS16Q9Y3D3 137 aaKnown RBP15.08■□□□□ 0
CLIP2-202ENST00000361545 FAM223BA6NKX1 122 aa15.08■□□□□ 0
CLIP2-202ENST00000361545 FAM223AQ8IWN6 122 aa15.08■□□□□ 0
CLIP2-202ENST00000361545 MBD3L1Q8WWY6 194 aa15.08■□□□□ 0
CLIP2-202ENST00000361545 RCHY1Q96PM5 261 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms