RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 OR10G4Q8NGN3 311 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 OR10G9Q8NGN4 311 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 OR10G7Q8NGN6 311 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 ZNF414Q96IQ9 312 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 MGST2Q99735 147 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 PEF1Q9UBV8 284 aaKnown RBP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 ZNF256Q9Y2P7 627 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 IGLV11-55A0A075B6I3 123 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 CTXND1A0A1B0GTU2 59 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 SNAPINO95295 136 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 SFTA3P0C7M3 94 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 GPX4P36969 197 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 CD69Q07108 199 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 PMS2P11Q13670 270 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 RNASEH2CQ8TDP1 164 aaKnown RBP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 CACNG8Q8WXS5 425 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 GGTLC1Q9BX51 225 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 KCNIP2Q9NS61 270 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 SELENOKQ9Y6D0 94 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.21□□□□□ -0.45
RAB5C-201ENST00000346213 A0A0G2JLM5 398 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 IZUMO1RA6ND01 250 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 CYB5BO43169 146 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 CSN3P07498 182 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 OR13C7P0DN81 318 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 RAB31Q13636 194 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 ZNF506Q5JVG8 444 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 LCN15Q6UWW0 184 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 FBXL7Q9UJT9 491 aa12.21□□□□□ -0.45
RAB5C-201ENST00000346213 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 FAM223BA6NKX1 122 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 IGLV1-51P01701 117 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 FAM223AQ8IWN6 122 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 SVBPQ8N300 66 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 ZNF114Q8NC26 417 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
RAB5C-201ENST00000346213 YIF1AO95070 293 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 RPL29P47914 159 aaKnown RBP12.19□□□□□ -0.46
RAB5C-201ENST00000346213 PPT1P50897 306 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 ATP5G2Q06055 141 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 KHDC3LQ587J8 217 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 OR9G4Q8NGQ1 327 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 RARRES2Q99969 163 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
RAB5C-201ENST00000346213 SLC35B3Q9H1N7 401 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 BIN3Q9NQY0 253 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 PXMP4Q9Y6I8 212 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 INSL3P51460 131 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 GAMTQ14353 236 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 MIC13Q5XKP0 118 aa12.19□□□□□ -0.46
RAB5C-201ENST00000346213 TENM3Q9P273 2699 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 LOC102723971A0A1B0GUV8 181 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 F8W735 103 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-201ENST00000346213 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-201ENST00000346213 GP9P14770 177 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 CDC34P49427 236 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-201ENST00000346213 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-201ENST00000346213 ICAM4Q14773 271 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 HAGHQ16775 308 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 ATRAIDQ6UW56 229 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 Q8N1Y9 231 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 SLC35E1Q96K37 410 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 C12orf57Q99622 126 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 ASCL2Q99929 193 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-201ENST00000346213 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
RAB5C-201ENST00000346213 KMT2CQ8NEZ4 4911 aaKnown RBP12.17□□□□□ -0.46
RAB5C-201ENST00000346213 IGHV3-21A0A0B4J1V1 117 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 OR2C1O95371 312 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 IFNA1P01562 189 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 SRP19P09132 144 aaKnown RBP12.17□□□□□ -0.46
RAB5C-201ENST00000346213 PRR20EP86478 221 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 PRR20CP86479 221 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 PRR20DP86480 221 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 PRR20BP86481 221 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 PRR20AP86496 221 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 MLANAQ16655 118 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 GNG13Q9P2W3 67 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 SLC45A2Q9UMX9 530 aa12.17□□□□□ -0.46
RAB5C-201ENST00000346213 SAV1Q9H4B6 383 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-201ENST00000346213 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-201ENST00000346213 IGKV1OR2-108A0A075B7D4 117 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
RAB5C-201ENST00000346213 LINC00869P0C866 280 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 BCL2P10415 239 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 MEOX2P50222 304 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 RPEL1Q2QD12 228 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 GCSAMLQ5JQS6 135 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms