RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SAMD12Q8N8I0 201 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 OR52E5Q8NH55 327 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 LHFPL5Q8TAF8 219 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 DNAH8Q96JB1 4490 aa11.22□□□□□ -0.61
NECTIN1-202ENST00000340882 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 ATG12O94817 140 aa11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 RCVRNP35243 200 aa11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 NUP62P37198 522 aaPredicted RBP11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 GABARAPL2P60520 117 aa11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 LYZP61626 148 aa11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 SLC25A39Q9BZJ4 359 aaPredicted RBP11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 NOP10Q9NPE3 64 aaKnown RBP11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
NECTIN1-202ENST00000340882 LRP1Q07954 4544 aaKnown RBP11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 CEBPZOSA8MTT3 80 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 HTN1P15515 57 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 MEF2DQ14814 521 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 NMSQ5H8A3 153 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 Q6ZSN1 163 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 ARRDC1Q8N5I2 433 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 ZNF503Q96F45 646 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 ZNF486Q96H40 463 aaPredicted RBP11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 LINC01587Q99440 93 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 SLC25A32Q9H2D1 315 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
NECTIN1-202ENST00000340882 TRAV8-2A0A0B4J237 113 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 ANKRD65E5RJM6 399 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 FAM229AH3BQW9 127 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 M6PRP20645 277 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 ERVFC1-1P60608 527 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 B2MP61769 119 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 OR2F1Q13607 317 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 KLF9Q13886 244 aaPredicted RBP11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 RNF182Q8N6D2 247 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 RSG1Q9BU20 258 aa11.19□□□□□ -0.62
NECTIN1-202ENST00000340882 ZFP92A6NM28 416 aa11.18□□□□□ -0.62
NECTIN1-202ENST00000340882 GAMTQ14353 236 aa11.18□□□□□ -0.62
NECTIN1-202ENST00000340882 GPR141Q7Z602 305 aa11.18□□□□□ -0.62
NECTIN1-202ENST00000340882 SNX29P2Q8IUI4 249 aa11.18□□□□□ -0.62
NECTIN1-202ENST00000340882 PFDN2Q9UHV9 154 aa11.18□□□□□ -0.62
NECTIN1-202ENST00000340882 A0A087WTM6 91 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 EREGO14944 169 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 DUSP14O95147 198 aaKnown RBP11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 CDS2O95674 445 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 IFNA5P01569 189 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 RPS19P39019 145 aaKnown RBP11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 TAS2R60P59551 318 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 RNASE8Q8TDE3 154 aaKnown RBP11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 PPP1R14BQ96C90 147 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 COPZ2Q9P299 210 aa11.17□□□□□ -0.62
NECTIN1-202ENST00000340882 BOLA2-SMG1P6H3BVE0 249 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 TMEM127O75204 238 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 MEOX2P50222 304 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 RNASE12Q5GAN4 147 aaKnown RBP11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 FAM219AQ8IW50 185 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 OR13C8Q8NGS7 320 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 SLC25A22Q9H936 323 aa11.16□□□□□ -0.62
NECTIN1-202ENST00000340882 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
NECTIN1-202ENST00000340882 A0A096LPF7 62 aa11.15□□□□□ -0.62
NECTIN1-202ENST00000340882 TMEM144Q7Z5S9 345 aa11.15□□□□□ -0.62
NECTIN1-202ENST00000340882 OR4D10Q8NGI6 311 aa11.15□□□□□ -0.62
NECTIN1-202ENST00000340882 TMEM222Q9H0R3 208 aa11.15□□□□□ -0.62
NECTIN1-202ENST00000340882 GAGE12BA1L429 117 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 SNRPGP15A8MWD9 76 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 KRTAP29-1A8MX34 341 aaPredicted RBP11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 SIVA1O15304 175 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 GAGE7O76087 117 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 CD3DP04234 171 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 GCSHP23434 173 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 GALR1P47211 349 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 VSIG2Q96IQ7 327 aa11.14□□□□□ -0.63
NECTIN1-202ENST00000340882 ZNF98A6NK75 572 aa11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 H3BNG1 76 aa11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 TMEM256Q8N2U0 113 aa11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 CCDC71LQ8N9Z2 235 aa11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 MARCH1Q8TCQ1 289 aa11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 RBPMSQ93062 196 aaKnown RBP11.13□□□□□ -0.63
NECTIN1-202ENST00000340882 FAT3Q8TDW7 4589 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms