RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TM4SF5O14894 197 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 IGHV3-7P01780 117 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 HBBP68871 147 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 TEPPQ6URK8 271 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 VGLL1Q99990 258 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 HCFC1P51610 2035 aa16.66■□□□□ 0.26
SPNS1-203ENST00000334536 TNFAIP6P98066 277 aaPredicted RBP16.65■□□□□ 0.26
SPNS1-203ENST00000334536 Q6ZS92 163 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 LCNL1Q6ZST4 164 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 C1orf159Q96HA4 380 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 GCM1Q9NP62 436 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 PRNDQ9UKY0 176 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 STPG3Q8N7X2 389 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 GAFA1Q96PS6 74 aa16.65■□□□□ 0.26
SPNS1-203ENST00000334536 CNOT1A5YKK6 2376 aaKnown RBP16.65■□□□□ 0.26
SPNS1-203ENST00000334536 SH2D7A6NKC9 451 aaPredicted RBP16.64■□□□□ 0.25
SPNS1-203ENST00000334536 SMAD7O15105 426 aaKnown RBP16.64■□□□□ 0.25
SPNS1-203ENST00000334536 ATP5IP56385 69 aaPredicted RBP16.64■□□□□ 0.25
SPNS1-203ENST00000334536 SSX8Q7RTT4 187 aa16.64■□□□□ 0.25
SPNS1-203ENST00000334536 LEAP2Q969E1 77 aa16.64■□□□□ 0.25
SPNS1-203ENST00000334536 NDFIP1Q9BT67 221 aa16.64■□□□□ 0.25
SPNS1-203ENST00000334536 C19orf24Q9BVV8 132 aa16.64■□□□□ 0.25
SPNS1-203ENST00000334536 IGHV1-46P01743 117 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 SMIM13P0DJ93 91 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 FAM201AQ5SY85 155 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 IGFBP2P18065 325 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 PSG5Q15238 335 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 PSMG4Q5JS54 123 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 UTF1Q5T230 341 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 SPATA31B1PQ5VZV4 182 aa16.63■□□□□ 0.25
SPNS1-203ENST00000334536 FOXH1O75593 365 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 TAS2R45P59539 299 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 PRR20EP86478 221 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 PRR20CP86479 221 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 PRR20DP86480 221 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 PRR20BP86481 221 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 PRR20AP86496 221 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 TTC9CQ8N5M4 171 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 SSMEM1Q8WWF3 244 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 SNRNP40Q96DI7 357 aaKnown RBP16.62■□□□□ 0.25
SPNS1-203ENST00000334536 GPR82Q96P67 336 aa16.62■□□□□ 0.25
SPNS1-203ENST00000334536 RPUSD1Q9UJJ7 312 aaKnown RBP16.62■□□□□ 0.25
SPNS1-203ENST00000334536 UPK2O00526 184 aa16.61■□□□□ 0.25
SPNS1-203ENST00000334536 CA1P00915 261 aaPredicted RBP16.61■□□□□ 0.25
SPNS1-203ENST00000334536 TEX36Q5VZQ5 186 aa16.61■□□□□ 0.25
SPNS1-203ENST00000334536 SLC25A48Q6ZT89 311 aaKnown RBP16.61■□□□□ 0.25
SPNS1-203ENST00000334536 FAM168AQ92567 244 aa16.61■□□□□ 0.25
SPNS1-203ENST00000334536 TEX50A0A1B0GTY4 177 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 GGTLC3B5MD39 225 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 CT83Q5H943 113 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 RPRMLQ8N4K4 120 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 NUP37Q8NFH4 326 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 PLEKHA3Q9HB20 300 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 ZNF355PQ9NSJ1 428 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 GVINP1Q7Z2Y8 2422 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 HIGD1CA8MV81 97 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 CD40P25942 277 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 PRCDQ00LT1 54 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 CCL13Q99616 98 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 HILPDAQ9Y5L2 63 aa16.6■□□□□ 0.25
SPNS1-203ENST00000334536 TET2Q6N021 2002 aaPredicted RBP16.59■□□□□ 0.25
SPNS1-203ENST00000334536 hADV38S2A0JD32 116 aa16.59■□□□□ 0.25
SPNS1-203ENST00000334536 VWC2LB2RUY7 222 aa16.59■□□□□ 0.25
SPNS1-203ENST00000334536 DUX4L9Q6RFH8 374 aaPredicted RBP16.59■□□□□ 0.25
SPNS1-203ENST00000334536 ABHD17AQ96GS6 310 aa16.59■□□□□ 0.25
SPNS1-203ENST00000334536 SSBP3Q9BWW4 388 aaPredicted RBP16.59■□□□□ 0.25
SPNS1-203ENST00000334536 CAMPP49913 170 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 C1orf122Q6ZSJ8 110 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 DEFB108BQ8NET1 73 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 FAM57AQ8TBR7 257 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 ZNF502Q8TBZ5 544 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 GTSF1Q8WW33 167 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 RAB37Q96AX2 223 aa16.58■□□□□ 0.25
SPNS1-203ENST00000334536 SSBP2P81877 361 aaPredicted RBP16.58■□□□□ 0.24
SPNS1-203ENST00000334536 FOXE3Q13461 319 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 MIR17HGQ75NE6 70 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 ASCL5Q7RTU5 278 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 SPAG8Q99932 426 aaPredicted RBP16.58■□□□□ 0.24
SPNS1-203ENST00000334536 FAM110AQ9BQ89 295 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 NAA38Q9BRA0 125 aaKnown RBP16.58■□□□□ 0.24
SPNS1-203ENST00000334536 ZNF747Q9BV97 191 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 ERG28Q9UKR5 140 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 CYSLTR1Q9Y271 337 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 LINC00312Q9Y6C7 94 aa16.58■□□□□ 0.24
SPNS1-203ENST00000334536 DSCAML1Q8TD84 2053 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 CSN1S1P47710 185 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 LGALS9BQ3B8N2 356 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 C2orf83Q53S99 150 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 LGALS9CQ6DKI2 356 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 FAM216BQ8N7L0 139 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 HINT2Q9BX68 163 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 HIGD1BQ9P298 99 aa16.57■□□□□ 0.24
SPNS1-203ENST00000334536 A0A1W2PRD5 423 aa16.56■□□□□ 0.24
SPNS1-203ENST00000334536 A0A1W2PRF3 423 aa16.56■□□□□ 0.24
SPNS1-203ENST00000334536 A0A1W2PRM7 423 aa16.56■□□□□ 0.24
SPNS1-203ENST00000334536 FAM27E3Q08E93 113 aa16.56■□□□□ 0.24
SPNS1-203ENST00000334536 RBMXL3Q8N7X1 1067 aaKnown RBP16.56■□□□□ 0.24
SPNS1-203ENST00000334536 NEU4Q8WWR8 484 aaPredicted RBP16.56■□□□□ 0.24
SPNS1-203ENST00000334536 GFRA4Q9GZZ7 299 aa16.56■□□□□ 0.24
SPNS1-203ENST00000334536 DSCAMO60469 2012 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1735.2 ms