RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ARL6Q9H0F7 186 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 DOK5Q9P104 306 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 U3KQE9 123 aa18.48■□□□□ 0.55
HOXC9-201ENST00000303450 IZUMO1RA6ND01 250 aa18.47■□□□□ 0.55
HOXC9-201ENST00000303450 HYPMO75409 117 aa18.47■□□□□ 0.55
HOXC9-201ENST00000303450 RPL29P47914 159 aaKnown RBP18.47■□□□□ 0.55
HOXC9-201ENST00000303450 PLP1P60201 277 aa18.47■□□□□ 0.55
HOXC9-201ENST00000303450 OPCMLQ14982 345 aa18.47■□□□□ 0.55
HOXC9-201ENST00000303450 TMEM61Q8N0U2 210 aa18.47■□□□□ 0.55
HOXC9-201ENST00000303450 STPG3Q8N7X2 389 aa18.47■□□□□ 0.55
HOXC9-201ENST00000303450 HMSDA8MTL9 139 aa18.46■□□□□ 0.55
HOXC9-201ENST00000303450 ZNF266Q14584 549 aa18.46■□□□□ 0.55
HOXC9-201ENST00000303450 PXDC1Q5TGL8 231 aa18.46■□□□□ 0.55
HOXC9-201ENST00000303450 Q6ZRG5 221 aa18.46■□□□□ 0.55
HOXC9-201ENST00000303450 ZNF256Q9Y2P7 627 aaPredicted RBP18.46■□□□□ 0.55
HOXC9-201ENST00000303450 OR5G3P0C626 314 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 S100A7P31151 101 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 B2MP61769 119 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 PRR20EP86478 221 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 PRR20CP86479 221 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 PRR20DP86480 221 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 PRR20BP86481 221 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 PRR20AP86496 221 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 HIGD1AQ9Y241 93 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 PXMP4Q9Y6I8 212 aa18.45■□□□□ 0.54
HOXC9-201ENST00000303450 TRAV25A0A0B4J276 109 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 C17orf112F2Z3M2 114 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 BUB3O43684 328 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 CD5P06127 495 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 GUCA2BQ16661 112 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 NEURL2Q9BR09 285 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 PARD6GQ9BYG4 376 aaPredicted RBP18.44■□□□□ 0.54
HOXC9-201ENST00000303450 KCNIP2Q9NS61 270 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 SLC39A9Q9NUM3 307 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 GP9P14770 177 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 TCF24Q7RTU0 167 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 S100A7AQ86SG5 101 aa18.44■□□□□ 0.54
HOXC9-201ENST00000303450 COX7A2P2O60397 106 aa18.43■□□□□ 0.54
HOXC9-201ENST00000303450 RPL11P62913 178 aaKnown RBP18.43■□□□□ 0.54
HOXC9-201ENST00000303450 C16orf54Q6UWD8 224 aa18.43■□□□□ 0.54
HOXC9-201ENST00000303450 RSG1Q9BU20 258 aa18.43■□□□□ 0.54
HOXC9-201ENST00000303450 ARV1Q9H2C2 271 aa18.43■□□□□ 0.54
HOXC9-201ENST00000303450 TSPAN4O14817 238 aa18.42■□□□□ 0.54
HOXC9-201ENST00000303450 ZNF345Q14585 488 aa18.42■□□□□ 0.54
HOXC9-201ENST00000303450 IGKV3-7A0A075B6H7 116 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 ELOA3CA0A087WX78 387 aaPredicted RBP18.41■□□□□ 0.54
HOXC9-201ENST00000303450 ZNF785A8K8V0 405 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 C1QBP02746 253 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 FAM90A2PQ658T7 463 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 PATE2Q6UY27 113 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 OR1L4Q8NGR5 311 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 UHRF2Q96PU4 802 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 PRR25Q96S07 402 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 SLC25A39Q9BZJ4 359 aaPredicted RBP18.41■□□□□ 0.54
HOXC9-201ENST00000303450 DNAJC4Q9NNZ3 241 aa18.41■□□□□ 0.54
HOXC9-201ENST00000303450 BORCS7-ASMTA0A0B4J1R7 106 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 HELTA6NFD8 242 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 ZNF98A6NK75 572 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 TAAR5O14804 337 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 PRB2P02812 416 aaPredicted RBP18.4■□□□□ 0.54
HOXC9-201ENST00000303450 C1orf194Q5T5A4 169 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 C10orf113Q5VZT2 155 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 OR8I2Q8N0Y5 310 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 KCNRGQ8N5I3 272 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 GLMPQ8WWB7 406 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 PFDN5Q99471 154 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 SLC25A22Q9H936 323 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 DNAH3Q8TD57 4116 aa18.4■□□□□ 0.54
HOXC9-201ENST00000303450 A0A0D9SG52 128 aa18.39■□□□□ 0.54
HOXC9-201ENST00000303450 CD300CQ08708 224 aa18.39■□□□□ 0.54
HOXC9-201ENST00000303450 HSD17B11Q8NBQ5 300 aa18.39■□□□□ 0.54
HOXC9-201ENST00000303450 TMEM37Q8WXS4 190 aa18.39■□□□□ 0.54
HOXC9-201ENST00000303450 SPAG8Q99932 426 aaPredicted RBP18.39■□□□□ 0.54
HOXC9-201ENST00000303450 SHANK2-AS3Q9BTD1 123 aa18.39■□□□□ 0.54
HOXC9-201ENST00000303450 H3BRN7 92 aa18.39■□□□□ 0.53
HOXC9-201ENST00000303450 PAFAH1B2P68402 229 aa18.39■□□□□ 0.53
HOXC9-201ENST00000303450 RPL7L1Q6DKI1 246 aaKnown RBP18.39■□□□□ 0.53
HOXC9-201ENST00000303450 SIGLEC15Q6ZMC9 328 aa18.39■□□□□ 0.53
HOXC9-201ENST00000303450 LINC00305Q7Z4B0 112 aa18.39■□□□□ 0.53
HOXC9-201ENST00000303450 SCRT1Q9BWW7 348 aa18.39■□□□□ 0.53
HOXC9-201ENST00000303450 CXCL2P19875 107 aa18.38■□□□□ 0.53
HOXC9-201ENST00000303450 GBGT1Q8N5D6 347 aa18.38■□□□□ 0.53
HOXC9-201ENST00000303450 HYLS1Q96M11 299 aa18.38■□□□□ 0.53
HOXC9-201ENST00000303450 AURKAIP1Q9NWT8 199 aaPredicted RBP18.38■□□□□ 0.53
HOXC9-201ENST00000303450 JTBO76095 146 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 TFPI2P48307 235 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 LEMD1Q68G75 181 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 GTSCR1Q86UQ5 136 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 GATAD1Q8WUU5 269 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 ARPC5LQ9BPX5 153 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 RNF24Q9Y225 148 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 TIMM9Q9Y5J7 89 aa18.37■□□□□ 0.53
HOXC9-201ENST00000303450 OR4C46A6NHA9 309 aa18.36■□□□□ 0.53
HOXC9-201ENST00000303450 DNASE2O00115 360 aaPredicted RBP18.36■□□□□ 0.53
HOXC9-201ENST00000303450 FFAR4Q5NUL3 377 aa18.36■□□□□ 0.53
HOXC9-201ENST00000303450 STXBP6Q8NFX7 210 aa18.36■□□□□ 0.53
HOXC9-201ENST00000303450 MS4A6AQ9H2W1 248 aa18.36■□□□□ 0.53
HOXC9-201ENST00000303450 ZFP69Q49AA0 526 aa18.35■□□□□ 0.53
HOXC9-201ENST00000303450 GCSAMLQ5JQS6 135 aa18.35■□□□□ 0.53
HOXC9-201ENST00000303450 WFDC3Q8IUB2 231 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms