RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 TEX29Q8N6K0 151 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 ANAPC16Q96DE5 110 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 FAM210BQ96KR6 192 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 OTOGQ6ZRI0 2925 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 C9JCJ5 164 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 C1QL4Q86Z23 238 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 C5orf56Q8N8D9 126 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 H3BUX3 64 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 IGHV3-23P01764 117 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 SMUG1Q53HV7 270 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 SGMS2Q8NHU3 365 aa16.39■□□□□ 0.21
YBX3-202ENST00000279550 FAM110DQ8TAY7 271 aaPredicted RBP16.39■□□□□ 0.21
YBX3-202ENST00000279550 MRPL27Q9P0M9 148 aaKnown RBP16.39■□□□□ 0.21
YBX3-202ENST00000279550 TRBV24-1A0A075B6N3 115 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 TOMM40O96008 361 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 MFAP4P55083 255 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 ECSCRQ19T08 205 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 CENPWQ5EE01 88 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 UNQ5815/PRO19632Q6UWF5 114 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 BLNKQ8WV28 456 aa16.38■□□□□ 0.21
YBX3-202ENST00000279550 SLC25A39Q9BZJ4 359 aaPredicted RBP16.38■□□□□ 0.21
YBX3-202ENST00000279550 HELTA6NFD8 242 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 H3BTX0 84 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 MYCNOSP40205 109 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 IL17RELQ6ZVW7 336 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 STXBP6Q8NFX7 210 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 ZNF48Q96MX3 618 aaPredicted RBP16.37■□□□□ 0.21
YBX3-202ENST00000279550 PYGO2Q9BRQ0 406 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 BIN3Q9NQY0 253 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 C21orf62Q9NYP8 219 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 FBXL7Q9UJT9 491 aa16.37■□□□□ 0.21
YBX3-202ENST00000279550 GNG7O60262 68 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 FABP1P07148 127 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 CD99P14209 185 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 ZNF491Q8N8L2 437 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 SFRP2Q96HF1 295 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 OR5B12Q96R08 314 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 YAE1D1Q9NRH1 226 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 WI2-2373I1.2A0A1W2PRP0 233 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 AMY1AP04745 511 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 Q56UQ5 140 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 TEX38Q6PEX7 206 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 IGF2BP2-AS1Q96M15 143 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 TMUB1Q9BVT8 246 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 MOB4Q9Y3A3 225 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 LY96Q9Y6Y9 160 aa16.36■□□□□ 0.21
YBX3-202ENST00000279550 G3V318 75 aa16.35■□□□□ 0.21
YBX3-202ENST00000279550 NBEAP1P0C6P0 100 aa16.35■□□□□ 0.21
YBX3-202ENST00000279550 YPEL3P61236 119 aaPredicted RBP16.35■□□□□ 0.21
YBX3-202ENST00000279550 RANP62826 216 aaKnown RBP16.35■□□□□ 0.21
YBX3-202ENST00000279550 LINC00479Q96M42 142 aa16.35■□□□□ 0.21
YBX3-202ENST00000279550 PITPNC1Q9UKF7 332 aa16.35■□□□□ 0.21
YBX3-202ENST00000279550 A6NDX4 124 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 H3BRN7 92 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 GNG4P50150 75 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 SNRPEP62304 92 aaKnown RBP16.34■□□□□ 0.21
YBX3-202ENST00000279550 GNG5P63218 68 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 LY6EQ16553 131 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 KLK9Q2XQG4 91 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 ZNF600Q6ZNG1 722 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 RNF125Q96EQ8 232 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 SHANK2-AS3Q9BTD1 123 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 KLK9Q9UKQ9 250 aa16.34■□□□□ 0.21
YBX3-202ENST00000279550 TRAV30A0A087WSZ9 112 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 IGLV2-8P01709 118 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 IGHV4-59P01825 116 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 IL4P05112 153 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 S100PP25815 95 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 SRP14P37108 136 aaKnown RBP16.33■□□□□ 0.21
YBX3-202ENST00000279550 IER3P46695 156 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 OR5I1Q13606 314 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 SMR3AQ99954 134 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 THYN1Q9P016 225 aa16.33■□□□□ 0.21
YBX3-202ENST00000279550 OR2T8A6NH00 312 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 PEX7O00628 323 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 PPP1R2P9O14990 202 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 GGCTO75223 188 aaKnown RBP16.33■□□□□ 0.2
YBX3-202ENST00000279550 TRGC2P03986 189 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 USF2Q15853 346 aaPredicted RBP16.33■□□□□ 0.2
YBX3-202ENST00000279550 OR10G8Q8NGN5 311 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 PRDM13Q9H4Q3 707 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 TMEM14CQ9P0S9 112 aa16.33■□□□□ 0.2
YBX3-202ENST00000279550 FLNBO75369 2602 aaKnown RBP16.32■□□□□ 0.2
YBX3-202ENST00000279550 BAHCC1Q9P281 2608 aa16.32■□□□□ 0.2
YBX3-202ENST00000279550 ACANP16112 2415 aa16.32■□□□□ 0.2
YBX3-202ENST00000279550 A0A1W2PPQ1 181 aa16.32■□□□□ 0.2
YBX3-202ENST00000279550 HIST1H1BP16401 226 aaKnown RBP16.32■□□□□ 0.2
YBX3-202ENST00000279550 FAM3BP58499 235 aaPredicted RBP16.32■□□□□ 0.2
YBX3-202ENST00000279550 Q6YL49 198 aa16.32■□□□□ 0.2
YBX3-202ENST00000279550 ZNF414Q96IQ9 312 aa16.32■□□□□ 0.2
YBX3-202ENST00000279550 ZNF586Q9NXT0 402 aa16.32■□□□□ 0.2
YBX3-202ENST00000279550 TRAV34A0A0B4J273 112 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 PGPA6NDG6 321 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 C5orf52A6NGY3 159 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 RHOGP84095 191 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 CHRDL1Q9BU40 450 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 TLN2Q9Y4G6 2542 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 PHOX2AO14813 284 aa16.31■□□□□ 0.2
YBX3-202ENST00000279550 SLC25A5P05141 298 aaKnown RBP16.31■□□□□ 0.2
YBX3-202ENST00000279550 CTSGP08311 255 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms