RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 NKX6-3A6NJ46 265 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 SLC25A17O43808 307 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 APELAP0DMC3 54 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 MYCNOSP40205 109 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 MMDQ15546 238 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 WFDC8Q8IUA0 241 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 NUP37Q8NFH4 326 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 CCL17Q92583 94 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
PHGDH-233ENST00000642021 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 TNFRSF1AP19438 455 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 ORM2P19652 201 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 RBMXL3Q8N7X1 1067 aaKnown RBP11.11□□□□□ -0.63
PHGDH-233ENST00000642021 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 CLEC7AQ9BXN2 247 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 CSTL1Q9H114 145 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 SAP30LQ9HAJ7 183 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 DLX1P56177 255 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
PHGDH-233ENST00000642021 THAP8Q8NA92 274 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 OR1L4Q8NGR5 311 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 GRAMD2BQ96HH9 432 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 IGHV3-21A0A0B4J1V1 117 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 HIGD1CA8MV81 97 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 CAMPP49913 170 aa11.11□□□□□ -0.63
PHGDH-233ENST00000642021 LINC00322Q6ZN03 302 aaPredicted RBP11.11□□□□□ -0.63
PHGDH-233ENST00000642021 WIPF2Q8TF74 440 aaPredicted RBP11.11□□□□□ -0.63
PHGDH-233ENST00000642021 TACC2O95359 2948 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 ZZEF1O43149 2961 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PPIAL4EA0A075B759 164 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PPIAL4DF5H284 164 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 TMEM178BH3BS89 294 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 H3BTX0 84 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 HYPMO75409 117 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PPIAL4FP0DN26 164 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 IGLC2P0DOY2 106 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PGPA6NDG6 321 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 PPBPP02775 128 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 OR1B1Q8NGR6 318 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 VSTM2AQ8TAG5 236 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 EPDR1Q9UM22 224 aa11.1□□□□□ -0.63
PHGDH-233ENST00000642021 TNFRSF13BO14836 293 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-233ENST00000642021 CD24P25063 80 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 PIEZO2Q9H5I5 2752 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 CLEC5AQ9NY25 188 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 WASHC3Q9Y3C0 194 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 ANKRD11Q6UB99 2663 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-233ENST00000642021 THBDP07204 575 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
PHGDH-233ENST00000642021 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 TCF24Q7RTU0 167 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 FAM57AQ8TBR7 257 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-233ENST00000642021 TNFRSF19Q9NS68 423 aa11.09□□□□□ -0.63
PHGDH-233ENST00000642021 MRPL27Q9P0M9 148 aaKnown RBP11.09□□□□□ -0.63
PHGDH-233ENST00000642021 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 C20orf202A1L168 122 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 ENSAO43768 121 aaKnown RBP11.08□□□□□ -0.64
PHGDH-233ENST00000642021 SLC25A5P05141 298 aaKnown RBP11.08□□□□□ -0.64
PHGDH-233ENST00000642021 CNTFRP26992 372 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 Q9UFV3 132 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 K7EP13 123 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 LOXP28300 417 aaPredicted RBP11.08□□□□□ -0.64
PHGDH-233ENST00000642021 DLX6P56179 175 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 RASL11AQ6T310 242 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 C11orf42Q8N5U0 333 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 STPG4Q8N801 248 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 ZNF596Q8TC21 504 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
PHGDH-233ENST00000642021 C16orf97H3BN30 126 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 NDUFB3O43676 98 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 FAM87AP0C7U9 286 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 LINC00311Q8N616 119 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 CSMD1Q96PZ7 3565 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 SERTM2A0A1B0GWG4 89 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 HSBP1O75506 76 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 CRYGCP07315 174 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 UBE2G1P62253 170 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 Q6ZN92 141 aa11.07□□□□□ -0.64
PHGDH-233ENST00000642021 UQCR10Q9UDW1 63 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms