RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 VSIRQ9H7M9 311 aa15.33■□□□□ 0.04
PHGDH-210ENST00000641115 PEF1Q9UBV8 284 aaKnown RBP15.33■□□□□ 0.04
PHGDH-210ENST00000641115 ZNF705EA8MWA4 302 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-210ENST00000641115 YIF1AO95070 293 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 LGALS1P09382 135 aaKnown RBP15.32■□□□□ 0.04
PHGDH-210ENST00000641115 RAB2AP61019 212 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 TCTEX1D4Q5JR98 221 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 ZNF600Q6ZNG1 722 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 OR10G4Q8NGN3 311 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 OR10G9Q8NGN4 311 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 OR10G7Q8NGN6 311 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 FAM213BQ8TBF2 198 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 PFDN5Q99471 154 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 RPRMQ9NS64 109 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 TEP1Q99973 2627 aaKnown RBP15.32■□□□□ 0.04
PHGDH-210ENST00000641115 CDX1P47902 265 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-210ENST00000641115 PXDC1Q5TGL8 231 aa15.32■□□□□ 0.04
PHGDH-210ENST00000641115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-210ENST00000641115 COX7A2P2O60397 106 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 TRBV12-3P01733 135 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 LYZP61626 148 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 FOXL1Q12952 345 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 GCSAMLQ5JQS6 135 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 OR1L4Q8NGR5 311 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 C19orf24Q9BVV8 132 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 DOK5Q9P104 306 aa15.31■□□□□ 0.04
PHGDH-210ENST00000641115 PUS1Q9Y606 427 aaKnown RBP eCLIP15.31■□□□□ 0.04
PHGDH-210ENST00000641115 NF1P21359 2839 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 OR2C1O95371 312 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 IL4P05112 153 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 OR5G3P0C626 314 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 ORM2P19652 201 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 FHITP49789 147 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 PLP1P60201 277 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 OR1B1Q8NGR6 318 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 GATAD1Q8WUU5 269 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 WFDC12Q8WWY7 111 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 RNF125Q96EQ8 232 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 SAT2Q96F10 170 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-210ENST00000641115 PBDC1Q9BVG4 233 aa15.3■□□□□ 0.04
PHGDH-210ENST00000641115 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-210ENST00000641115 IGHV3-35A0A0C4DH35 117 aa15.29■□□□□ 0.04
PHGDH-210ENST00000641115 GGCTO75223 188 aaKnown RBP15.29■□□□□ 0.04
PHGDH-210ENST00000641115 CD28P10747 220 aa15.29■□□□□ 0.04
PHGDH-210ENST00000641115 FAM122CQ6P4D5 195 aa15.29■□□□□ 0.04
PHGDH-210ENST00000641115 RPP25LQ8N5L8 163 aaKnown RBP15.29■□□□□ 0.04
PHGDH-210ENST00000641115 C11orf44Q8N8P7 122 aa15.29■□□□□ 0.04
PHGDH-210ENST00000641115 C4orf3Q8WVX3 66 aa15.29■□□□□ 0.04
PHGDH-210ENST00000641115 ACTR3CQ9C0K3 210 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-210ENST00000641115 A0A1W2PPV4 95 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 BMPR1BO00238 502 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 HYPMO75409 117 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 CDC34P49427 236 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-210ENST00000641115 RHOBP62745 196 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 BLOC1S1P78537 153 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 C10orf113Q5VZT2 155 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 KLHL30-AS1Q8NEE0 82 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 PCNPQ8WW12 178 aaKnown RBP15.28■□□□□ 0.04
PHGDH-210ENST00000641115 DNAJC4Q9NNZ3 241 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 WI2-2373I1.2A0A1W2PRP0 233 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 NMBP08949 121 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 TMEM37Q8WXS4 190 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
PHGDH-210ENST00000641115 RNF2Q99496 336 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 SLC25A22Q9H936 323 aa15.28■□□□□ 0.04
PHGDH-210ENST00000641115 TSSC4Q9Y5U2 329 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-210ENST00000641115 NUDT19A8MXV4 375 aa15.27■□□□□ 0.03
PHGDH-210ENST00000641115 I3L521 148 aa15.27■□□□□ 0.03
PHGDH-210ENST00000641115 FAM78BQ5VT40 261 aa15.27■□□□□ 0.03
PHGDH-210ENST00000641115 CITED2Q99967 270 aaPredicted RBP15.27■□□□□ 0.03
PHGDH-210ENST00000641115 HIGD1AQ9Y241 93 aa15.27■□□□□ 0.03
PHGDH-210ENST00000641115 CTXND1A0A1B0GTU2 59 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 SEC14L6B5MCN3 397 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 NDUFA4O00483 81 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 H2AFB1P0C5Y9 115 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 CLLU1Q5K131 121 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 TOMM20LQ6UXN7 152 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 S100A7AQ86SG5 101 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 MRPL32Q9BYC8 188 aaKnown RBP15.26■□□□□ 0.03
PHGDH-210ENST00000641115 ZFAND3Q9H8U3 227 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 SEPSECSQ9HD40 501 aaKnown RBP15.26■□□□□ 0.03
PHGDH-210ENST00000641115 C2CD3Q4AC94 2353 aa15.26■□□□□ 0.03
PHGDH-210ENST00000641115 HSPB1P04792 205 aaKnown RBP15.25■□□□□ 0.03
PHGDH-210ENST00000641115 USF2Q15853 346 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-210ENST00000641115 ZNF726P1Q15940 193 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 RPEL1Q2QD12 228 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 PATE2Q6UY27 113 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 C18orf65Q6ZTR6 163 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 LINC00305Q7Z4B0 112 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 RAB24Q969Q5 203 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 UHRF2Q96PU4 802 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 FUT9Q9Y231 359 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 IGHV4OR15-8A0A075B7B6 117 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 A0A087WW49 117 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 TEX46H3BTG2 121 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 SFT2D1Q8WV19 159 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 ZNF414Q96IQ9 312 aa15.25■□□□□ 0.03
PHGDH-210ENST00000641115 MRPL27Q9P0M9 148 aaKnown RBP15.25■□□□□ 0.03
PHGDH-210ENST00000641115 A0A1W2PRX2 142 aa15.24■□□□□ 0.03
PHGDH-210ENST00000641115 MAP1LC3B2A6NCE7 125 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms