RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 FRMPD3Q5JV73 1810 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 CRYBA2P53672 197 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 PLPPR1Q8TBJ4 325 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 NEUROG3Q9Y4Z2 214 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 K7EP34 96 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 NPFFO15130 113 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 GAGE2AQ6NT46 116 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 IGHV3OR16-8A0A075B7F1 116 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 NPIPB4C9JG80 1138 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 IGHMP01871 453 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 CD300EQ496F6 205 aaPredicted RBP7.3□□□□□ -1.24
CSMD1-216ENST00000602557 PILRBQ9UKJ0 227 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 TRBV24-1A0A075B6N3 115 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 CELA3AP09093 270 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 DEFB104AQ8WTQ1 72 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 TMPRSS3P57727 454 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 K7EP13 123 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 NCR2O95944 276 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 EEF1AKMT3Q96AZ1 226 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 CYTL1Q9NRR1 136 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 PLXNA3P51805 1871 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 M0R2P5 195 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 CD5LO43866 347 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 FMC1Q96HJ9 113 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 C19orf24Q9BVV8 132 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 TOMM7Q9P0U1 55 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 FBXL7Q9UJT9 491 aa7.3□□□□□ -1.24
CSMD1-216ENST00000602557 TMEM14DPA8MWL7 114 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 NXT2Q9NPJ8 142 aaKnown RBP7.29□□□□□ -1.24
CSMD1-216ENST00000602557 COL4A5P29400 1685 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 Q8NFD4 153 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 GDF15Q99988 308 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 K7ERJ3 54 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 UNQ6494/PRO21346Q6UXR6 183 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 ZFYVE26Q68DK2 2539 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 PCNX3Q9H6A9 2034 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 TRBV20-1A0A075B6N2 111 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 PRB3Q04118 309 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-216ENST00000602557 Q9H3A6 140 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 SLC25A15Q9Y619 301 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 C9JAW5 83 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 PROB1E7EW31 1015 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 SYS1-DBNDD2H3BUS1 97 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
CSMD1-216ENST00000602557 TIMP3P35625 211 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 TRACP01848 142 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 STPG4Q8N801 248 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 ARPC1AQ92747 370 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 SFXN3Q9BWM7 321 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 IFNL4K9M1U5 179 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 ZNF138P52744 262 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 FAM159AQ6UWV7 190 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 TNS1Q9HBL0 1735 aaKnown RBP7.29□□□□□ -1.24
CSMD1-216ENST00000602557 C9orf118A6NHY6 69 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 NPPCP23582 126 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
CSMD1-216ENST00000602557 ANXA2RQ3ZCQ2 193 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 SCARF2Q96GP6 870 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-216ENST00000602557 JPT1Q9UK76 154 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 C17orf98A8MV24 154 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 GGTLC3B5MD39 225 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 UCNP55089 124 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 H3BRM9 83 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 TRGV3P03979 118 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 ATP5L2Q7Z4Y8 100 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-216ENST00000602557 C9JQL5 133 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 TSKUQ8WUA8 353 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 CHAC1Q9BUX1 264 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 FOXA2Q9Y261 457 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-216ENST00000602557 NABP1Q96AH0 204 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 CCL25O15444 150 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 CD69Q07108 199 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 FBXL15Q9H469 300 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 SETD2Q9BYW2 2564 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-216ENST00000602557 CNTFRP26992 372 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 ZXDCQ2QGD7 858 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-216ENST00000602557 Q6ZWC4 215 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 TEX45Q8NA69 505 aa7.28□□□□□ -1.24
CSMD1-216ENST00000602557 ETDBQ3ZM63 59 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 TMEM8BA6NDV4 472 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 EPOPA6NHQ4 379 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 EIF4EBP2Q13542 120 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-216ENST00000602557 RNASE8Q8TDE3 154 aaKnown RBP7.27□□□□□ -1.25
CSMD1-216ENST00000602557 OBSL1O75147 1896 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 MLNRO43193 412 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 LINC01560Q8TB33 94 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 PPIFP30405 207 aaKnown RBP7.27□□□□□ -1.25
CSMD1-216ENST00000602557 SAP25Q8TEE9 199 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 PPDPFLQ8WWR9 84 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 TMEM242Q9NWH2 141 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 TLN2Q9Y4G6 2542 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 PCOLCEQ15113 449 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 KLF17Q5JT82 389 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-216ENST00000602557 LINC01590Q5TEZ4 76 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 RNF182Q8N6D2 247 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms