RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-215ENST00000597649 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 H3BP45 60 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 MT-CO2P00403 227 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 ETFRF1Q6IPR1 90 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 Q6ZNX1 250 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 MARC2Q969Z3 335 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 ZNF436Q9C0F3 470 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 C21orf62Q9NYP8 219 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
SHKBP1-215ENST00000597649 KIR2DL5BA0A0G2JN68 375 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 KIR2DL5BA0A0G2JPC4 375 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 I3L2K1 104 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 K7EIM0 57 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 TSC22D2O75157 780 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 PET100P0DJ07 73 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 FCGR2BP31994 310 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 CAV2P51636 162 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 MFAP4P55083 255 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 Q56UQ5 140 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 PVRIGQ6DKI7 326 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 KIR2DL5AQ8N109 375 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 STPG3Q8N7X2 389 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 ZNF502Q8TBZ5 544 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 PPP1R1CQ8WVI7 109 aa12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-215ENST00000597649 C15orf62A8K5M9 175 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 TSPAN4O14817 238 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 GPR183P32249 361 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 PAX9P55771 341 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 ASB13Q8WXK3 278 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 MAP6D1Q9H9H5 199 aa12.11□□□□□ -0.47
SHKBP1-215ENST00000597649 PKD1P98161 4303 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 E5RGE8 158 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 TMEM50AO95807 157 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 GIPP09681 153 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 SLC25A4P12235 298 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 NPBWR1P48145 328 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 ELLP55199 621 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 THAP6Q8TBB0 222 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 TXN2Q99757 166 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
SHKBP1-215ENST00000597649 hCG_2014768A0A024R1R8 64 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 GNG7O60262 68 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 SCGB2A1O75556 95 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 MPC2O95563 127 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 GPX4P36969 197 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 RAP2BP61225 183 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 FGL1Q08830 312 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 MLANAQ16655 118 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 TMEM217Q8N7C4 229 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 OR10P1Q8NGE3 313 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 SLC35E1Q96K37 410 aa12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 FNDC4Q9H6D8 234 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-215ENST00000597649 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 OR2T8A6NH00 312 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 METTL15P1P0C7V9 234 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 ZNF124Q15973 351 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 TMEM14EPQ6UXP3 125 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 APRG1Q8IVJ8 170 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 ATP6V0BQ99437 205 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 SLC25A31Q9H0C2 315 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 OR5AC2Q9NZP5 309 aa12.08□□□□□ -0.48
SHKBP1-215ENST00000597649 NUPL2O15504 423 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 TGOLN2O43493 480 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 P2RY1P47900 373 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 RND2P52198 227 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 STX12Q86Y82 276 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 C11orf1Q9H5F2 150 aa12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-215ENST00000597649 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 TRAV30A0A087WSZ9 112 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 H0YIZ8 118 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 TMEM252Q8N6L7 170 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 OR2T35Q8NGX2 323 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 OR4X1Q8NH49 305 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 ZNF414Q96IQ9 312 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 FBXL17Q9UF56 701 aa12.06□□□□□ -0.48
SHKBP1-215ENST00000597649 SMCO3A2RU48 225 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 CLN5O75503 358 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 CST7O76096 145 aa12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 NUP62P37198 522 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-215ENST00000597649 SULT1A1P50225 295 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms