RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RNF126Q9BV68 326 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-210ENST00000590541 IFNA10P01566 189 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 IGKV1-17P01599 117 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 EIF2B2P49770 351 aaKnown RBP12.53□□□□□ -0.4
RETREG3-210ENST00000590541 ZNF79Q15937 498 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 PRSS54Q6PEW0 395 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 GBGT1Q8N5D6 347 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 DTD1Q8TEA8 209 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 Q8WTZ3 238 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
RETREG3-210ENST00000590541 MRPL36Q9P0J6 103 aaKnown RBP12.53□□□□□ -0.4
RETREG3-210ENST00000590541 IGHV3OR16-13A0A075B7E8 117 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 IGHV3-74A0A0B4J1X5 117 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 GIG44P09565 113 aaPredicted RBP12.52□□□□□ -0.41
RETREG3-210ENST00000590541 IGLC1P0CG04 106 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 SLC25A6P12236 298 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 OR10J1P30954 320 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 RND2P52198 227 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.41
RETREG3-210ENST00000590541 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 MS4A6AQ9H2W1 248 aa12.52□□□□□ -0.41
RETREG3-210ENST00000590541 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-210ENST00000590541 APOHP02749 345 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-210ENST00000590541 AMBPP02760 352 aa12.51□□□□□ -0.41
RETREG3-210ENST00000590541 LGALS9BQ3B8N2 356 aa12.51□□□□□ -0.41
RETREG3-210ENST00000590541 TIGITQ495A1 244 aa12.51□□□□□ -0.41
RETREG3-210ENST00000590541 LEMD1Q68G75 181 aa12.51□□□□□ -0.41
RETREG3-210ENST00000590541 TMED4Q7Z7H5 227 aa12.51□□□□□ -0.41
RETREG3-210ENST00000590541 OR1S1Q8NH92 325 aa12.51□□□□□ -0.41
RETREG3-210ENST00000590541 FAM90A26D6RGX4 464 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 P0DMU3 169 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 FAM231AP0DMU4 169 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 FAM231CP0DMU5 169 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 MIFP14174 115 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-210ENST00000590541 DEFB131AP59861 70 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 UBE2MP61081 183 aaKnown RBP12.5□□□□□ -0.41
RETREG3-210ENST00000590541 TMEM170AQ8WVE7 144 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 RBKSQ9H477 322 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 X6R8D5 127 aa12.5□□□□□ -0.41
RETREG3-210ENST00000590541 HELTA6NFD8 242 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 NAP1L6A6NFF2 107 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 ZNF705EA8MWA4 302 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-210ENST00000590541 MED6O75586 246 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 NXPH3O95157 252 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.412e-12■■■■□ 20
RETREG3-210ENST00000590541 VAMP1P23763 118 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 GPX4P36969 197 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-210ENST00000590541 P2RY1P47900 373 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 INPP1P49441 399 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 CENPSQ8N2Z9 138 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 FAM24BQ8N5W8 94 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 NPIPB3Q92617 1050 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 U3KQE9 123 aa12.49□□□□□ -0.41
RETREG3-210ENST00000590541 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 PITX3O75364 302 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 SFT2D2O95562 160 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 TOMM40O96008 361 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 NUP62P37198 522 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-210ENST00000590541 CIB3Q96Q77 187 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-210ENST00000590541 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 SRRQ9GZT4 340 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 PFDN2Q9UHV9 154 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 RABAC1Q9UI14 185 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 CELA1Q9UNI1 258 aa12.48□□□□□ -0.41
RETREG3-210ENST00000590541 DEFB131BA0A096LNP1 70 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 K7EQG2 157 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 FABP1P07148 127 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 RAB11AP62491 216 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 RPP30P78346 268 aaKnown RBP12.47□□□□□ -0.41
RETREG3-210ENST00000590541 C12orf74Q32Q52 190 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 Q6ZR54 194 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 ZNF767PQ75MW2 155 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 STHQ8IWL8 128 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
RETREG3-210ENST00000590541 IL4P05112 153 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 C4BPBP20851 252 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 TMEM41BQ5BJD5 291 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 TRIQKQ629K1 86 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 C16orf54Q6UWD8 224 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
RETREG3-210ENST00000590541 STXBP6Q8NFX7 210 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 OR51G1Q8NGK1 321 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 NDUFAF3Q9BU61 184 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 NDUFA13Q9P0J0 144 aa12.46□□□□□ -0.41
RETREG3-210ENST00000590541 LRP1BQ9NZR2 4599 aa12.45□□□□□ -0.42
RETREG3-210ENST00000590541 CENPXA8MT69 81 aa12.45□□□□□ -0.42
RETREG3-210ENST00000590541 PPP1R1AQ13522 171 aa12.45□□□□□ -0.42
RETREG3-210ENST00000590541 CNPY1Q3B7I2 92 aa12.45□□□□□ -0.42
RETREG3-210ENST00000590541 GLMPQ8WWB7 406 aa12.45□□□□□ -0.42
RETREG3-210ENST00000590541 SLC35E1Q96K37 410 aa12.45□□□□□ -0.42
RETREG3-210ENST00000590541 C7orf50Q9BRJ6 194 aaKnown RBP12.45□□□□□ -0.42
RETREG3-210ENST00000590541 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms