RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 HNRNPCP07910 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
VAT1-204ENST00000587147 PSG1P11464 419 aa12.67□□□□□ -0.38
VAT1-204ENST00000587147 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
VAT1-204ENST00000587147 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
VAT1-204ENST00000587147 ACOT7LQ6ZUV0 252 aa12.67□□□□□ -0.38
VAT1-204ENST00000587147 C11orf1Q9H5F2 150 aa12.67□□□□□ -0.38
VAT1-204ENST00000587147 FRMD6-AS1P0C7T7 363 aa12.66□□□□□ -0.38
VAT1-204ENST00000587147 S100A7P31151 101 aa12.66□□□□□ -0.38
VAT1-204ENST00000587147 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
VAT1-204ENST00000587147 RNF125Q96EQ8 232 aa12.66□□□□□ -0.38
VAT1-204ENST00000587147 LYRM2Q9NU23 88 aaPredicted RBP12.66□□□□□ -0.38
VAT1-204ENST00000587147 SLC45A2Q9UMX9 530 aa12.66□□□□□ -0.38
VAT1-204ENST00000587147 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 IGKV1OR2-108A0A075B7D4 117 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 HELTA6NFD8 242 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 DEDDO75618 318 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 CD7P09564 240 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 METTL15P1P0C7V9 234 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 AP2S1P53680 142 aaPredicted RBP12.65□□□□□ -0.38
VAT1-204ENST00000587147 SELENOTP62341 195 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 AKR1C1Q04828 323 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 NPVFQ9HCQ7 196 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 RABAC1Q9UI14 185 aa12.65□□□□□ -0.38
VAT1-204ENST00000587147 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.38
VAT1-204ENST00000587147 OR11H12B2RN74 326 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 GOSR2O14653 212 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 SSNA1O43805 119 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 RLN2P04090 185 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 P2RY1P47900 373 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 ZNF90Q03938 601 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 RAB32Q13637 225 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
VAT1-204ENST00000587147 TCF24Q7RTU0 167 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 TUBA4BQ9H853 241 aa12.64□□□□□ -0.39
VAT1-204ENST00000587147 BUB3O43684 328 aa12.63□□□□□ -0.39
VAT1-204ENST00000587147 APOHP02749 345 aaPredicted RBP12.63□□□□□ -0.39
VAT1-204ENST00000587147 PET100P0DJ07 73 aa12.63□□□□□ -0.39
VAT1-204ENST00000587147 S100A10P60903 97 aa12.63□□□□□ -0.39
VAT1-204ENST00000587147 C1orf194Q5T5A4 169 aa12.63□□□□□ -0.39
VAT1-204ENST00000587147 C16orf54Q6UWD8 224 aa12.63□□□□□ -0.39
VAT1-204ENST00000587147 LINC00322Q6ZN03 302 aaPredicted RBP12.63□□□□□ -0.39
VAT1-204ENST00000587147 BPIFCQ8NFQ6 507 aa12.63□□□□□ -0.39
VAT1-204ENST00000587147 IGHV3-49A0A0A0MS15 119 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 DFFBO76075 338 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 SULT1A1P50225 295 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 BCAP31P51572 246 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 CAV2P51636 162 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 HBG1P69891 147 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 HBG2P69892 147 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 TEPPQ6URK8 271 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 STX12Q86Y82 276 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
VAT1-204ENST00000587147 FBXL17Q9UF56 701 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 DNAH9Q9NYC9 4486 aa12.62□□□□□ -0.39
VAT1-204ENST00000587147 IGHV3OR16-13A0A075B7E8 117 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 IGHV3-74A0A0B4J1X5 117 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 E5RGE8 158 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 S100A11P31949 105 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 H2BFSP57053 126 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 PLP1P60201 277 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 RGS21Q2M5E4 152 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 MS4A6AQ9H2W1 248 aa12.61□□□□□ -0.39
VAT1-204ENST00000587147 SMCO3A2RU48 225 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 ATP6V1FQ16864 119 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 VWC2Q2TAL6 325 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 PXDC1Q5TGL8 231 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 CYP2G1PQ6ZSU1 146 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 SBSPONQ8IVN8 264 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 LILRB2Q8N423 598 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 DEFB125Q8N687 156 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 TMEM252Q8N6L7 170 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 ASB13Q8WXK3 278 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 SLC25A31Q9H0C2 315 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 SRD5A3Q9H8P0 318 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 RNF24Q9Y225 148 aa12.6□□□□□ -0.39
VAT1-204ENST00000587147 DNASE2O00115 360 aaPredicted RBP12.59□□□□□ -0.39
VAT1-204ENST00000587147 CCNKO75909 580 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 SIX6O95475 246 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 LYZP61626 148 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 RRAS2P62070 204 aaPredicted RBP12.59□□□□□ -0.39
VAT1-204ENST00000587147 BAXQ07812 192 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 ARL16Q0P5N6 197 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 SAMD13Q5VXD3 122 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 PPP1R1CQ8WVI7 109 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 ZMAT4Q9H898 229 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 ALG5Q9Y673 324 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
VAT1-204ENST00000587147 IGHV3-66A0A0C4DH42 116 aa12.58□□□□□ -0.4
VAT1-204ENST00000587147 FAM24AA6NFZ4 105 aa12.58□□□□□ -0.4
VAT1-204ENST00000587147 RPL11P62913 178 aaKnown RBP12.58□□□□□ -0.4
VAT1-204ENST00000587147 RAB31Q13636 194 aa12.58□□□□□ -0.4
VAT1-204ENST00000587147 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms