RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 C20orf202A1L168 122 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 CD40P25942 277 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 TEX36Q5VZQ5 186 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 LEMD1Q68G75 181 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 ST6GALNAC6Q969X2 333 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 URB1-AS1Q96HZ7 61 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 IGHV3-72A0A0B4J1Y9 119 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 NKX6-3A6NJ46 265 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 C22orf46C9J442 243 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 SUB1P53999 127 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCARF1-205ENST00000571272 RELQ04864 619 aaPredicted RBP14.05□□□□□ -0.16
SCARF1-205ENST00000571272 ADGRG4Q8IZF6 3080 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 A0A1W2PPI3 338 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 OR2J3O76001 311 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 MYCNOSP40205 109 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 TMEM30BQ3MIR4 351 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 CCL25O15444 150 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 PTTG1IPP53801 180 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 SSX8Q7RTT4 187 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 PGLYRP4Q96LB8 373 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 CHRDL1Q9BU40 450 aa14.04□□□□□ -0.16
SCARF1-205ENST00000571272 IGLV2-23P01705 113 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 ZNF137PP52743 207 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 THAP8Q8NA92 274 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 VSTM2AQ8TAG5 236 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 ASCL3Q9NQ33 180 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 A0A1B0GXF2 115 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 ENSAO43768 121 aaKnown RBP14.03□□□□□ -0.16
SCARF1-205ENST00000571272 NBEAP1P0C6P0 100 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 GPR82Q96P67 336 aa14.03□□□□□ -0.16
SCARF1-205ENST00000571272 MRPS16Q9Y3D3 137 aaKnown RBP14.03□□□□□ -0.16
SCARF1-205ENST00000571272 IGHV2-26A0A0B4J1V2 119 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 HBBP68871 147 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 ZADH2Q8N4Q0 377 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 ZNF596Q8TC21 504 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 GTSF1Q8WW33 167 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 CBY1Q9Y3M2 126 aa14.02□□□□□ -0.16
SCARF1-205ENST00000571272 INS-IGF2F8WCM5 200 aa14.02□□□□□ -0.17
SCARF1-205ENST00000571272 FAM87AP0C7U9 286 aa14.02□□□□□ -0.17
SCARF1-205ENST00000571272 PERPQ96FX8 193 aa14.02□□□□□ -0.17
SCARF1-205ENST00000571272 GSX1Q9H4S2 264 aaPredicted RBP14.02□□□□□ -0.17
SCARF1-205ENST00000571272 LYPD2Q6UXB3 125 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 CCL17Q92583 94 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 RPP21Q9H633 154 aaKnown RBP14.01□□□□□ -0.17
SCARF1-205ENST00000571272 WASHC3Q9Y3C0 194 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 DMXL1Q9Y485 3027 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 TOX4O94842 621 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 PRB4P10163 310 aaPredicted RBP14.01□□□□□ -0.17
SCARF1-205ENST00000571272 ATP5L2Q7Z4Y8 100 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 TMEM70Q9BUB7 260 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 ZNF835Q9Y2P0 537 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 P01737 135 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 TNFRSF1AP19438 455 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 PRB3Q04118 309 aaPredicted RBP14.01□□□□□ -0.17
SCARF1-205ENST00000571272 MEF2CQ06413 473 aaPredicted RBP14.01□□□□□ -0.17
SCARF1-205ENST00000571272 OR4F17Q8NGA8 305 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 ORAOV1Q8WV07 137 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 MLST8Q9BVC4 326 aa14.01□□□□□ -0.17
SCARF1-205ENST00000571272 C1orf185Q5T7R7 199 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 TRAV8-1A0A0A6YYK1 113 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 OR4C46A6NHA9 309 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 KALRNO60229 2985 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 FTH1P19P0C7X4 201 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 CA7P43166 264 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 DLX1P56177 255 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 KLF12Q9Y4X4 402 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 TTC28Q96AY4 2481 aa14□□□□□ -0.17
SCARF1-205ENST00000571272 A8MWL6 223 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 VMA21Q3ZAQ7 101 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 FAM120AOSQ5T036 256 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 WFDC8Q8IUA0 241 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 STXBP6Q8NFX7 210 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 OR4A5Q8NH83 315 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 POLEQ07864 2286 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 C17orf100A8MU93 164 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 ZNF138P52744 262 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 C3orf36Q3SXR2 165 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 Q71RC1 249 aaPredicted RBP13.99□□□□□ -0.17
SCARF1-205ENST00000571272 ERASQ7Z444 233 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 TMEM186Q96B77 213 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 MCRIP2Q9BUT9 160 aaKnown RBP13.99□□□□□ -0.17
SCARF1-205ENST00000571272 TIMM8BQ9Y5J9 83 aaPredicted RBP13.99□□□□□ -0.17
SCARF1-205ENST00000571272 COX11Q9Y6N1 276 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 OTOGLQ3ZCN5 2332 aa13.99□□□□□ -0.17
SCARF1-205ENST00000571272 PPIAL4EA0A075B759 164 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 PPIAL4DF5H284 164 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 PPIAL4FP0DN26 164 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 DAZAP1Q96EP5 407 aaKnown RBP13.98□□□□□ -0.17
SCARF1-205ENST00000571272 Q9H3A6 140 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 IGHV1-24A0A0C4DH33 117 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 hDV102S1A0JD36 115 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 IGLC7A0M8Q6 106 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 CNTFRP26992 372 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 MRGPRG-AS1Q2M3A8 158 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 ZNF738Q8NE65 137 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 PRSS22Q9GZN4 317 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 ZGRF1Q86YA3 2104 aa13.98□□□□□ -0.17
SCARF1-205ENST00000571272 H0Y8G0 127 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms