RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 LINC00305Q7Z4B0 112 aa17.63■□□□□ 0.41
PBX1-218ENST00000560469 PDE6DO43924 150 aa17.62■□□□□ 0.41
PBX1-218ENST00000560469 CST9LP1Q5W188 147 aa17.62■□□□□ 0.41
PBX1-218ENST00000560469 CIARTQ8N365 385 aaPredicted RBP17.62■□□□□ 0.41
PBX1-218ENST00000560469 NECAP1Q8NC96 275 aa17.62■□□□□ 0.41
PBX1-218ENST00000560469 FAM167A-AS1Q96KT0 104 aa17.62■□□□□ 0.41
PBX1-218ENST00000560469 NIPSNAP3BQ9BS92 247 aa17.62■□□□□ 0.41
PBX1-218ENST00000560469 SLC25A2Q9BXI2 301 aa17.62■□□□□ 0.41
PBX1-218ENST00000560469 IGHV4-59P01825 116 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 RHOGP84095 191 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 BTN1A1Q13410 526 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 OR5AU1Q8NGC0 362 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 OR51G1Q8NGK1 321 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 ZNF503Q96F45 646 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 PUS1Q9Y606 427 aaKnown RBP eCLIP17.61■□□□□ 0.41
PBX1-218ENST00000560469 S4R3C0 116 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 F6UZH7 168 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 F8W735 103 aaPredicted RBP17.61■□□□□ 0.41
PBX1-218ENST00000560469 MORN5Q5VZ52 161 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 Q6YL49 198 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 STXBP6Q8NFX7 210 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 UHRF2Q96PU4 802 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 HIGD1AQ9Y241 93 aa17.61■□□□□ 0.41
PBX1-218ENST00000560469 TRAV5A0A0B4J249 113 aa17.6■□□□□ 0.41
PBX1-218ENST00000560469 FAM74A7A6NL05 159 aa17.6■□□□□ 0.41
PBX1-218ENST00000560469 H3BQ15 152 aa17.6■□□□□ 0.41
PBX1-218ENST00000560469 SMAD7O15105 426 aaKnown RBP17.6■□□□□ 0.41
PBX1-218ENST00000560469 LYZP61626 148 aa17.6■□□□□ 0.41
PBX1-218ENST00000560469 C15orf32Q32M92 178 aa17.6■□□□□ 0.41
PBX1-218ENST00000560469 FAM74A3Q4VXF1 159 aa17.6■□□□□ 0.41
PBX1-218ENST00000560469 GAR1Q9NY12 217 aaKnown RBP17.6■□□□□ 0.41
PBX1-218ENST00000560469 M0R036 132 aa17.59■□□□□ 0.41
PBX1-218ENST00000560469 ATP5G3P48201 142 aa17.59■□□□□ 0.41
PBX1-218ENST00000560469 PRDM13Q9H4Q3 707 aa17.59■□□□□ 0.41
PBX1-218ENST00000560469 AP4M1O00189 453 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 BRI3O95415 125 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 BLCAPP62952 87 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 AWAT1Q58HT5 328 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 ZNF502Q8TBZ5 544 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 Q8WTZ3 238 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 TVP23CQ96ET8 276 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 PAXXQ9BUH6 204 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 OR51M1Q9H341 326 aa17.58■□□□□ 0.41
PBX1-218ENST00000560469 MRPL27Q9P0M9 148 aaKnown RBP17.58■□□□□ 0.41
PBX1-218ENST00000560469 YTHDF2Q9Y5A9 579 aaKnown RBP17.58■□□□□ 0.41
PBX1-218ENST00000560469 H3BUA1 57 aa17.58■□□□□ 0.4
PBX1-218ENST00000560469 RHEBQ15382 184 aa17.58■□□□□ 0.4
PBX1-218ENST00000560469 S100A7AQ86SG5 101 aa17.58■□□□□ 0.4
PBX1-218ENST00000560469 EEF1AKMT3Q96AZ1 226 aa17.58■□□□□ 0.4
PBX1-218ENST00000560469 ZNF580Q9UK33 172 aa17.58■□□□□ 0.4
PBX1-218ENST00000560469 VPREB3Q9UKI3 123 aa17.58■□□□□ 0.4
PBX1-218ENST00000560469 WI2-2373I1.2A0A1W2PRP0 233 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 FAM223BA6NKX1 122 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 ZNF727A8MUV8 499 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 OR2C1O95371 312 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 IGHV3-23P01764 117 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 UBE2L3P68036 154 aaKnown RBP17.57■□□□□ 0.4
PBX1-218ENST00000560469 FAM223AQ8IWN6 122 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 ZNF491Q8N8L2 437 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 RNF125Q96EQ8 232 aa17.57■□□□□ 0.4
PBX1-218ENST00000560469 CREBBPQ92793 2442 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 TRBV7-1A0A0A6YYK4 115 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 A0A1W2PRE2 83 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 OR2T8A6NH00 312 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 DNASE2O00115 360 aaPredicted RBP17.56■□□□□ 0.4
PBX1-218ENST00000560469 OR10J4P0C629 311 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 PNRC1Q12796 327 aaPredicted RBP17.56■□□□□ 0.4
PBX1-218ENST00000560469 KIAA0141Q14154 515 aaPredicted RBP17.56■□□□□ 0.4
PBX1-218ENST00000560469 MS4A10Q96PG2 267 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 ATP6V0BQ99437 205 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 SMIM7Q9BQ49 75 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 PARLQ9H300 379 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 LINC00527Q9UJ94 153 aa17.56■□□□□ 0.4
PBX1-218ENST00000560469 C7orf77A4D0Y5 90 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 NUPL2O15504 423 aaKnown RBP17.55■□□□□ 0.4
PBX1-218ENST00000560469 IL4P05112 153 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 CTSGP08311 255 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 RPUSD4Q96CM3 377 aaKnown RBP17.55■□□□□ 0.4
PBX1-218ENST00000560469 SLC25A39Q9BZJ4 359 aaPredicted RBP17.55■□□□□ 0.4
PBX1-218ENST00000560469 CSPG4Q6UVK1 2322 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 PPIFP30405 207 aaKnown RBP17.55■□□□□ 0.4
PBX1-218ENST00000560469 ATP5G2Q06055 141 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 C20orf24Q9BUV8 137 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 RPS10P5Q9NQ39 176 aa17.55■□□□□ 0.4
PBX1-218ENST00000560469 CELSR1Q9NYQ6 3014 aa17.54■□□□□ 0.4
PBX1-218ENST00000560469 PDZD2O15018 2839 aa17.54■□□□□ 0.4
PBX1-218ENST00000560469 PYYP10082 97 aa17.54■□□□□ 0.4
PBX1-218ENST00000560469 ZNF674Q2M3X9 581 aa17.54■□□□□ 0.4
PBX1-218ENST00000560469 SDF2L1Q9HCN8 221 aa17.54■□□□□ 0.4
PBX1-218ENST00000560469 NAT8Q9UHE5 227 aa17.54■□□□□ 0.4
PBX1-218ENST00000560469 GCN1Q92616 2671 aaKnown RBP17.53■□□□□ 0.4
PBX1-218ENST00000560469 NPPCP23582 126 aa17.53■□□□□ 0.4
PBX1-218ENST00000560469 FXYD5Q96DB9 178 aa17.53■□□□□ 0.4
PBX1-218ENST00000560469 B4DEV8 164 aa17.52■□□□□ 0.4
PBX1-218ENST00000560469 TRGV3P03979 118 aa17.52■□□□□ 0.4
PBX1-218ENST00000560469 GPR183P32249 361 aa17.52■□□□□ 0.4
PBX1-218ENST00000560469 TMEM241Q24JQ0 296 aa17.52■□□□□ 0.4
PBX1-218ENST00000560469 Q6ZS46 218 aa17.52■□□□□ 0.4
PBX1-218ENST00000560469 NOL4LQ96MY1 436 aaPredicted RBP17.52■□□□□ 0.4
PBX1-218ENST00000560469 SHANK2-AS3Q9BTD1 123 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms