RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
SCNN1A-215ENST00000540037 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
SCNN1A-215ENST00000540037 ATMQ13315 3056 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 A0A087X0K7 114 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 LEPROTL1O95214 131 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 MYCNOSP40205 109 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 ERHP84090 104 aaKnown RBP11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 MZT1Q08AG7 82 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 RBMXL3Q8N7X1 1067 aaKnown RBP11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 C1orf162Q8NEQ5 155 aaPredicted RBP11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 RITA1Q96K30 269 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 GSX1Q9H4S2 264 aaPredicted RBP11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 DKK4Q9UBT3 224 aa11.21□□□□□ -0.62
SCNN1A-215ENST00000540037 BVES-AS1Q5T3Y7 98 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 HCP5Q6MZN7 132 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 C22orf34Q6ZV56 151 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 UBALD2Q8IYN6 164 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 RPRMLQ8N4K4 120 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 ZNF430Q9H8G1 570 aaPredicted RBP11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 PLSCR4Q9NRQ2 329 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 TCRBV4S1A1TA0A5B7 111 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 C22orf46C9J442 243 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 IGHG3P01860 377 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 PDPNQ86YL7 162 aa11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 RPP21Q9H633 154 aaKnown RBP11.2□□□□□ -0.62
SCNN1A-215ENST00000540037 LRRC10Q5BKY1 277 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 AMMECR1LQ6DCA0 310 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 CACNG8Q8WXS5 425 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 PKDREJQ9NTG1 2253 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 SAPCD1Q5SSQ6 148 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 RNF7Q9UBF6 113 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 SEM1Q6ZVN7 128 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 GPR82Q96P67 336 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 PROCRQ9UNN8 238 aa11.19□□□□□ -0.62
SCNN1A-215ENST00000540037 FCN3O75636 299 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 CD59P13987 128 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 TCTAP57738 103 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 PRR33A8MZF0 331 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 P01737 135 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 S100A7P31151 101 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 TNFAIP6P98066 277 aaPredicted RBP11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 SLC25A34Q6PIV7 304 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 OR1L4Q8NGR5 311 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 FAM222BQ8WU58 562 aa11.18□□□□□ -0.62
SCNN1A-215ENST00000540037 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 KLK10O43240 276 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 IGHV1-46P01743 117 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 NBEAP1P0C6P0 100 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 BPIFB3P59826 476 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 CCL8P80075 99 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 PRB3Q04118 309 aaPredicted RBP11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ATP5L2Q7Z4Y8 100 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 FLYWCH2Q96CP2 140 aaKnown RBP11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ZNF835Q9Y2P0 537 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ZNF788Q6ZQV5 615 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ZNF833PQ6ZTB9 187 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ZNF318Q5VUA4 2279 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 SLC25A17O43808 307 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 COTL1Q14019 142 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 ZNF474Q6S9Z5 364 aaPredicted RBP11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 OSR1Q8TAX0 266 aaPredicted RBP11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 SCRT2Q9NQ03 307 aa11.17□□□□□ -0.62
SCNN1A-215ENST00000540037 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 APOA2P02652 100 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 DLX1P56177 255 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 TRAV8-6A0A0B4J262 113 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 A8MWL6 223 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 RHOGP84095 191 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 KLF12Q9Y4X4 402 aa11.16□□□□□ -0.62
SCNN1A-215ENST00000540037 CDX4O14627 284 aaPredicted RBP11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 NCR2O95944 276 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 VPS25Q9BRG1 176 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 Q9H3A6 140 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 hADV38S2A0JD32 116 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 CHEK1O14757 476 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 LTAP01374 205 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 GLRXP35754 106 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 PSG9Q00887 426 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 EXOC3-AS1Q8N2X6 119 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 OR5AN1Q8NGI8 311 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 RAB9BQ9NP90 201 aa11.15□□□□□ -0.62
SCNN1A-215ENST00000540037 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 TCRAP04437 139 aa11.14□□□□□ -0.63
SCNN1A-215ENST00000540037 OCIAD2Q56VL3 154 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms