RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 MTURNQ8N3F0 131 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 ZNF645Q8N7E2 425 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 NEXN-AS1Q8NBZ9 246 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 OR52E5Q8NH55 327 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 OR51H1Q8NH63 302 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 C5orf30Q96GV9 206 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 IGF2BP2-AS1Q96M15 143 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 AP1S3Q96PC3 154 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 GGTLC1Q9BX51 225 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 TMEM191AQ9H0A3 160 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 YAE1D1Q9NRH1 226 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 SIGLEC8Q9NYZ4 499 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 LSM7Q9UK45 103 aaKnown RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 TRAPPC2LQ9UL33 140 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 NPIPA1Q9UND3 350 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 PIGLQ9Y2B2 252 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 GOLGA4Q13439 2230 aaKnown RBP2.54□□□□□ -2
CSDE1-216ENST00000534389 TMEM131Q92545 1883 aa2.54□□□□□ -2
CSDE1-216ENST00000534389 SCN10AQ9Y5Y9 1956 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 A0A096LNJ9 63 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 LILRA5A6NI73 299 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 IGLL5B9A064 214 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 DHRS3O75911 302 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 IGHG4P01861 327 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 APOA2P02652 100 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 OR9G9P0C7N8 305 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 MGST1P10620 155 aaKnown RBP2.53□□□□□ -2
CSDE1-216ENST00000534389 PLA2G2AP14555 144 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 CD27P26842 260 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 OPRK1P41145 380 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 P2RY2P41231 377 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 MFAP2P55001 183 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 DSCR4P56555 118 aaPredicted RBP2.53□□□□□ -2
CSDE1-216ENST00000534389 RBM11P57052 281 aaKnown RBP2.53□□□□□ -2
CSDE1-216ENST00000534389 TCTAP57738 103 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 BRWD1-AS2P59051 145 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 PPP1CAP62136 330 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 CATR1Q13166 79 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 KLRD1Q13241 179 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 GUSBP1Q15486 140 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 C3AR1Q16581 482 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 SPINK9Q5DT21 86 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 TIMM23BQ5SRD1 257 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 LYSMD4Q5XG99 296 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 MIC13Q5XKP0 118 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 CARD17Q5XLA6 110 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 RUSC1-AS1Q66K80 236 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 TMEM42Q69YG0 159 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 FAM53AQ6NSI3 398 aaPredicted RBP2.53□□□□□ -2
CSDE1-216ENST00000534389 NFE4Q86UQ8 179 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 RAB42Q8N4Z0 105 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 ZNF441Q8N8Z8 693 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 NUP35Q8NFH5 326 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 PP6455Q8WZ26 134 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 RAB1CQ92928 201 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 KIR2DL4Q99706 377 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 MGST2Q99735 147 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 HRASLS2Q9NWW9 162 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 OR1A1Q9P1Q5 309 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 POLDIP2Q9Y2S7 368 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 CSDC2Q9Y534 153 aaKnown RBP2.53□□□□□ -2
CSDE1-216ENST00000534389 MYO9BQ13459 2157 aa2.53□□□□□ -2
CSDE1-216ENST00000534389 PRRC2BQ5JSZ5 2229 aaKnown RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 RTTNQ86VV8 2226 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 hADV38S2A0JD32 116 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 C5orf49A4QMS7 147 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TMEM8BA6NDV4 472 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 GGTLC3B5MD39 225 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 C2CD4DB7Z1M9 353 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 PRAC2D3DTV9 90 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 PRSS46E5RG02 174 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 F5H5K5 113 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 F8W1H4 67 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 H0Y8G0 127 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TNFSF11O14788 317 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ZG16O60844 167 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 LEPROTL1O95214 131 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 CXorf1O96002 111 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 RBP4P02753 201 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 PRSS1P07477 247 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 GABRG2P18507 467 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 DRD3P35462 400 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 FBXW4P57775 412 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 RPL30P62888 115 aaKnown RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 GRB2P62993 217 aaKnown RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 EIF4EBP1Q13541 118 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ALKBH6Q3KRA9 238 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 FAM106AQ4KMX7 169 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 Q6AWC8 147 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 MYO7BQ6PIF6 2116 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 RASL11AQ6T310 242 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 AMTNQ6UX39 209 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 ZNF562Q6V9R5 426 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 MIR17HGQ75NE6 70 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 YRDCQ86U90 279 aaKnown RBP2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TMEM219Q86XT9 240 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 NHLRC2Q8NBF2 726 aa2.52□□□□□ -2.01
CSDE1-216ENST00000534389 TMEM178AQ8NBL3 297 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms