RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TNFSF9P41273 254 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 CRYBA2P53672 197 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 XGP55808 180 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 HERV-K104P61576 105 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 GNG5P63218 68 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 FAM27D1Q5T7N8 215 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 TMEM207Q6UWW9 146 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 ZNF550Q7Z398 422 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 SPATA12Q7Z6I5 190 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 TMEM86AQ8N2M4 240 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 RYBPQ8N488 228 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-219ENST00000534049 RNF128Q8TEB7 428 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 RNF138Q8WVD3 245 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 APOBEC4Q8WW27 367 aaKnown RBP3.35□□□□□ -1.87
ITGB1-219ENST00000534049 GTSF1Q8WW33 167 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 BAALCQ8WXS3 180 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 RASL10AQ92737 203 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 PLEKHB2Q96CS7 222 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 SFXN3Q9BWM7 321 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 IMUPQ9GZP8 106 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 PARP12Q9H0J9 701 aaKnown RBP3.35□□□□□ -1.87
ITGB1-219ENST00000534049 HRASLS2Q9NWW9 162 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 TP53TG1Q9Y2A0 90 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 KLHDC2Q9Y2U9 406 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 LY96Q9Y6Y9 160 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 FRYQ5TBA9 3013 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 FREM2Q5SZK8 3169 aa3.35□□□□□ -1.87
ITGB1-219ENST00000534049 A0A0A6YYD5 115 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 TRAV24A0A0B4J272 114 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 MDFIC2A0A1B0GVS7 189 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 E9PLD3 99 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 C11orf98E9PRG8 122 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 K7EN84 100 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 FCN1O00602 326 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 SLC17A2O00624 439 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 FFAR1O14842 300 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 HCRTO43612 131 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 DUSP14O95147 198 aaKnown RBP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 NDUFC2O95298 119 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 CPSF4O95639 269 aaKnown RBP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 RENP00797 406 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 NGFP01138 241 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 IGHG1P01857 330 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 ZNF688P0C7X2 276 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 VPREB1P12018 145 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 PRDX3P30048 256 aaKnown RBP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 OPRK1P41145 380 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 IER3P46695 156 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LMO4P61968 165 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 RPS11P62280 158 aaKnown RBP eCLIP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 CCL20P78556 96 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 KLF5Q13887 457 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 TAL2Q16559 108 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 IBA57Q5T440 356 aaKnown RBP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 C1orf195Q5TG92 126 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LYSMD4Q5XG99 296 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 Q6ZS49 121 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LINC00336Q6ZUF6 198 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 ANKRD37Q7Z713 158 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 ATOH7Q8N100 152 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 RAB42Q8N4Z0 105 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LRTM2Q8N967 370 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 GATD1Q8NB37 220 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 MORN4Q8NDC4 146 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LMX1AQ8TE12 382 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 FGF14Q92915 247 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 NEURL3Q96EH8 262 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 PRELID3AQ96N28 172 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LINC01587Q99440 93 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 KIR2DL4Q99706 377 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 FAM103A1Q9BTL3 118 aaKnown RBP3.34□□□□□ -1.87
ITGB1-219ENST00000534049 BCL2L10Q9HD36 194 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 IL36BQ9NZH7 164 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 GNG13Q9P2W3 67 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 LAMTOR3Q9UHA4 124 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 TMED7Q9Y3B3 224 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 SPTBN2O15020 2390 aa3.34□□□□□ -1.87
ITGB1-219ENST00000534049 CITO14578 2027 aa3.34□□□□□ -1.88
ITGB1-219ENST00000534049 PTPRZ1P23471 2315 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 SMG1Q96Q15 3661 aaKnown RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CEP295Q9C0D2 2601 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 KIF26AQ9ULI4 1882 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 USP24Q9UPU5 2620 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 TRBV5-5A0A0J9YX44 114 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 A0A1B0GWB2 263 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 TMEM89A2RUT3 159 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 RIIAD1A6NNX1 92 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CEBPZOSA8MTT3 80 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 K7ENP7 123 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 M0R2P5 195 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 ZFAND5O76080 213 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 DPM2O94777 84 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 CD55P08174 381 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 MRPL3P09001 348 aaKnown RBP3.33□□□□□ -1.88
ITGB1-219ENST00000534049 IGLC6P0CF74 106 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 B4GALT1P15291 398 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 PTGDSP41222 190 aa3.33□□□□□ -1.88
ITGB1-219ENST00000534049 SGSHP51688 502 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms