RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 SLC35B4Q969S0 331 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 LINC00052Q96N35 136 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 PPP1R2P1Q96PQ5 205 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 HIST1H2BLQ99880 126 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 USE1Q9NZ43 259 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 PKIGQ9Y2B9 76 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.24□□□□□ -2.45
ATM-217ENST00000531957 ZDBF2Q9HCK1 2354 aa-0.24□□□□□ -2.45
ATM-217ENST00000531957 HRNRQ86YZ3 2850 aaPredicted RBP-0.24□□□□□ -2.45
ATM-217ENST00000531957 C1orf196B1AJZ1 125 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 F8W1H4 67 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 DCTN3O75935 186 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 ISG15P05161 165 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 RPL5P46777 297 aaKnown RBP-0.25□□□□□ -2.45
ATM-217ENST00000531957 FOXA3P55318 350 aaPredicted RBP-0.25□□□□□ -2.45
ATM-217ENST00000531957 RPS20P60866 119 aaKnown RBP-0.25□□□□□ -2.45
ATM-217ENST00000531957 QRFPP83859 136 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 CD200R1LQ6Q8B3 271 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 GDPD1Q8N9F7 314 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 OR52L1Q8NGH7 329 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 OR52E6Q96RD3 313 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 CCDC90BQ9GZT6 254 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 WFDC10AQ9H1F0 79 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 UBAP1Q9NZ09 502 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 CYSLTR1Q9Y271 337 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 PIEZO1Q92508 2521 aa-0.25□□□□□ -2.45
ATM-217ENST00000531957 TRBV30A0A0K0K1B3 111 aa-0.26□□□□□ -2.45
ATM-217ENST00000531957 PIRO00625 290 aa-0.26□□□□□ -2.45
ATM-217ENST00000531957 OR2J2O76002 312 aa-0.26□□□□□ -2.45
ATM-217ENST00000531957 HIST1H1TP22492 207 aaPredicted RBP-0.26□□□□□ -2.45
ATM-217ENST00000531957 SPCS3P61009 180 aa-0.26□□□□□ -2.45
ATM-217ENST00000531957 DOCK5Q9H7D0 1870 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 ECM29Q5VYK3 1845 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 KDM6AO15550 1401 aaPredicted RBP-0.27□□□□□ -2.45
ATM-217ENST00000531957 TPRP12270 2363 aaKnown RBP-0.27□□□□□ -2.45
ATM-217ENST00000531957 RBP1P09455 135 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 MAGEA2P43356 314 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 SLC30A7Q8NEW0 376 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 ZNF431Q8TF32 576 aaPredicted RBP-0.27□□□□□ -2.45
ATM-217ENST00000531957 SLAMF6Q96DU3 332 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 MRPS26Q9BYN8 205 aaKnown RBP-0.27□□□□□ -2.45
ATM-217ENST00000531957 FLNCQ14315 2725 aa-0.27□□□□□ -2.45
ATM-217ENST00000531957 ASH1LQ9NR48 2969 aaKnown RBP-0.27□□□□□ -2.45
ATM-217ENST00000531957 C9orf84Q5VXU9 1444 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 TNS3Q68CZ2 1445 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 NUP155O75694 1391 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 HIVEP3Q5T1R4 2406 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 SBF1O95248 1867 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 TRAV23DV6A0A075B6W5 121 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 TRAV10A0A0B4J240 114 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 CALB1P05937 261 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 SMIM10L2AP0DMW4 78 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 SMIM10L2BP0DMW5 78 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 KRTAP6-1Q3LI64 71 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 SPATA45Q537H7 98 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 WFDC5Q8TCV5 224 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 CANT1Q8WVQ1 401 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 C20orf27Q9GZN8 174 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 MYH10P35580 1976 aa-0.28□□□□□ -2.45
ATM-217ENST00000531957 OR4C46A6NHA9 309 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 TIMM17BO60830 172 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 DYNLT1P63172 113 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 HIST3H3Q16695 136 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 C8orf74Q6P047 294 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 C4orf22Q6V702 233 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 Q8IYB0 196 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 TMEM86BQ8N661 226 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 DCUN1D1Q96GG9 259 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 ZC2HC1AQ96GY0 325 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 PRADC1Q9BSG0 188 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 PCTPQ9UKL6 214 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 FBXO5Q9UKT4 447 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 RNF11Q9Y3C5 154 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 IGF2RP11717 2491 aa-0.29□□□□□ -2.46
ATM-217ENST00000531957 MUC12Q9UKN1 5478 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 CD3DP04234 171 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 SERPINE1P05121 402 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 SPTBP11277 2137 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 EIF5AP63241 154 aaKnown RBP-0.3□□□□□ -2.46
ATM-217ENST00000531957 OR5D14Q8NGL3 314 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 FAM172AQ8WUF8 416 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 IDI2-AS1Q9NZ38 188 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 KNTC1P50748 2209 aa-0.3□□□□□ -2.46
ATM-217ENST00000531957 OTOGQ6ZRI0 2925 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 MUC2Q02817 5179 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 MED1Q15648 1581 aaPredicted RBP-0.31□□□□□ -2.46
ATM-217ENST00000531957 TRAV26-2A0A0B4J265 109 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 CYB5BO43169 146 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 TGOLN2O43493 480 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 PPYP01298 95 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 ZNF833PQ6ZTB9 187 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 PXT1Q8NFP0 134 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 LYSMD1Q96S90 227 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 LY96Q9Y6Y9 160 aa-0.31□□□□□ -2.46
ATM-217ENST00000531957 ZNF727A8MUV8 499 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 FAM25EA8MYX2 175 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 JMJD7-PLA2G4BH0Y9G9 81 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 J3QRK9 145 aa-0.32□□□□□ -2.46
ATM-217ENST00000531957 ERC2-IT1O76042 136 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms