RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 STXBP6Q8NFX7 210 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 BLNKQ8WV28 456 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 RNF5Q99942 180 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 C7orf69Q9H7B7 122 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 I3L2K1 104 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 SERF1AO75920 110 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 FAM231DQ6ZW35 169 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 BAGE2Q86Y30 109 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 IGFBPL1Q8WX77 278 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 RAB1BQ9H0U4 201 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 SERTAD4Q9NUC0 356 aa13.98□□□□□ -0.17
USH1C-205ENST00000527020 IGLC1P0CG04 106 aa13.97□□□□□ -0.17
USH1C-205ENST00000527020 Q0VG73 95 aa13.97□□□□□ -0.17
USH1C-205ENST00000527020 LEMD1Q68G75 181 aa13.97□□□□□ -0.17
USH1C-205ENST00000527020 CFHR4Q92496 578 aa13.97□□□□□ -0.17
USH1C-205ENST00000527020 SSBP3Q9BWW4 388 aaPredicted RBP13.97□□□□□ -0.17
USH1C-205ENST00000527020 NAT8BQ9UHF3 227 aa13.97□□□□□ -0.17
USH1C-205ENST00000527020 EPDR1Q9UM22 224 aa13.97□□□□□ -0.17
USH1C-205ENST00000527020 NBEAP1P0C6P0 100 aa13.96□□□□□ -0.17
USH1C-205ENST00000527020 ARF6P62330 175 aa13.96□□□□□ -0.17
USH1C-205ENST00000527020 TMEM183BQ1AE95 376 aa13.96□□□□□ -0.17
USH1C-205ENST00000527020 WDR73Q6P4I2 378 aa13.96□□□□□ -0.17
USH1C-205ENST00000527020 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.17
USH1C-205ENST00000527020 OR11H6Q8NGC7 330 aa13.96□□□□□ -0.17
USH1C-205ENST00000527020 PGPA6NDG6 321 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 A8MWP6 167 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 MT-ND6P03923 174 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 IQCJQ1A5X6 159 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 FBLN7Q53RD9 439 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 MRPL54Q6P161 138 aaKnown RBP13.96□□□□□ -0.18
USH1C-205ENST00000527020 MS4A10Q96PG2 267 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 CBLN4Q9NTU7 201 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 KLF12Q9Y4X4 402 aa13.96□□□□□ -0.18
USH1C-205ENST00000527020 IZUMO1RA6ND01 250 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 AMY1AP04745 511 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
USH1C-205ENST00000527020 KLRD1Q13241 179 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 REC114Q7Z4M0 266 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 NUDT10Q8NFP7 164 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 NUDT11Q96G61 164 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 WNT10AQ9GZT5 417 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 PSG1P11464 419 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 HTR1DP28221 377 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 PLGLAQ15195 96 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 KIAA1644Q3SXP7 199 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 Q6ZWC4 215 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 GNB4Q9HAV0 340 aa13.95□□□□□ -0.18
USH1C-205ENST00000527020 H3BTX0 84 aa13.94□□□□□ -0.18
USH1C-205ENST00000527020 RPL19P84098 196 aaKnown RBP13.94□□□□□ -0.18
USH1C-205ENST00000527020 MMDQ15546 238 aa13.94□□□□□ -0.18
USH1C-205ENST00000527020 COX19Q49B96 90 aa13.94□□□□□ -0.18
USH1C-205ENST00000527020 SGK494Q96LW2 274 aa13.94□□□□□ -0.18
USH1C-205ENST00000527020 DPM3Q9P2X0 92 aa13.94□□□□□ -0.18
USH1C-205ENST00000527020 HILPDAQ9Y5L2 63 aa13.94□□□□□ -0.18
USH1C-205ENST00000527020 ODF3BA8MYP8 253 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 CD33P20138 364 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 PAFAH1B2P68402 229 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 NOL4LQ96MY1 436 aaPredicted RBP13.93□□□□□ -0.18
USH1C-205ENST00000527020 SRSF8Q9BRL6 282 aaKnown RBP13.93□□□□□ -0.18
USH1C-205ENST00000527020 K7EIM0 57 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 BMPR1BO00238 502 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 SCGB1D1O95968 90 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 IGKV1-17P01599 117 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 TPPP2P59282 170 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 LYZP61626 148 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 BAGE3Q86Y29 109 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 TIMD4Q96H15 378 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 GRAMD2BQ96HH9 432 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 NAGKQ9UJ70 344 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 HIGD1AQ9Y241 93 aa13.93□□□□□ -0.18
USH1C-205ENST00000527020 NBR2O15453 112 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 CD24P25063 80 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 ZNF600Q6ZNG1 722 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 MLST8Q9BVC4 326 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 POLR3KQ9Y2Y1 108 aaPredicted RBP13.92□□□□□ -0.18
USH1C-205ENST00000527020 LOC105371242A0A075B767 164 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 M0R1W7 72 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 NDUFA3O95167 84 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 CNIH1O95406 144 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 UBE2G1P62253 170 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 NHLH1Q02575 133 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 PRR27Q6MZM9 219 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 C5orf17Q8NAS9 161 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 NUP35Q8NFH5 326 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 NPBQ8NG41 125 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 ATG101Q9BSB4 218 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 SLC25A39Q9BZJ4 359 aaPredicted RBP13.92□□□□□ -0.18
USH1C-205ENST00000527020 Q9H3A6 140 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 RPH3ALQ9UNE2 315 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 SPTBN4Q9H254 2564 aa13.92□□□□□ -0.18
USH1C-205ENST00000527020 COL6A6A6NMZ7 2263 aa13.91□□□□□ -0.18
USH1C-205ENST00000527020 GDF5OSQ5U4N7 250 aa13.91□□□□□ -0.18
USH1C-205ENST00000527020 LINC00322Q6ZN03 302 aaPredicted RBP13.91□□□□□ -0.18
USH1C-205ENST00000527020 WIPF2Q8TF74 440 aaPredicted RBP13.91□□□□□ -0.18
USH1C-205ENST00000527020 NEU4Q8WWR8 484 aaPredicted RBP13.91□□□□□ -0.18
USH1C-205ENST00000527020 MRPL27Q9P0M9 148 aaKnown RBP13.91□□□□□ -0.18
USH1C-205ENST00000527020 CSMD1Q96PZ7 3565 aa13.91□□□□□ -0.18
USH1C-205ENST00000527020 PRTN3P24158 256 aa13.9□□□□□ -0.18
USH1C-205ENST00000527020 GPR82Q96P67 336 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms