RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
SF3B2-202ENST00000524475 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 SSNA1O43805 119 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 DEDDO75618 318 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 IL4P05112 153 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 HNRNPCP07910 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
SF3B2-202ENST00000524475 CD81P60033 236 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 USF2Q15853 346 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-202ENST00000524475 ST8SIA2Q92186 375 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 RNF125Q96EQ8 232 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 C19orf73Q9NVV2 129 aa11.32□□□□□ -0.6
SF3B2-202ENST00000524475 HUWE1Q7Z6Z7 4374 aaKnown RBP11.31□□□□□ -0.6
SF3B2-202ENST00000524475 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 APOHP02749 345 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-202ENST00000524475 IGHV4-30-4P0DP06 118 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 H2BFSP57053 126 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 S100A10P60903 97 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 ZNF90Q03938 601 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 AKR1C1Q04828 323 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 GRAMD2BQ96HH9 432 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 MGAT4CQ9UBM8 478 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 PFDN2Q9UHV9 154 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 ALG5Q9Y673 324 aa11.31□□□□□ -0.6
SF3B2-202ENST00000524475 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 CCNKO75909 580 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 SIX6O95475 246 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 RLN2P04090 185 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 CD7P09564 240 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
SF3B2-202ENST00000524475 P2RY1P47900 373 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 CAV2P51636 162 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 TCF24Q7RTU0 167 aa11.3□□□□□ -0.6
SF3B2-202ENST00000524475 E5RGE8 158 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 BUB3O43684 328 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 FRMD6-AS1P0C7T7 363 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
SF3B2-202ENST00000524475 SULT1A1P50225 295 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 BCAP31P51572 246 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-202ENST00000524475 SELENOTP62341 195 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 PAFAH1B2P68402 229 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 OXA1LQ15070 435 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 STX12Q86Y82 276 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 LILRB2Q8N423 598 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 TMEM252Q8N6L7 170 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 BPIFCQ8NFQ6 507 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
SF3B2-202ENST00000524475 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 HELTA6NFD8 242 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 OR11H12B2RN74 326 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 DFFBO76075 338 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 PET100P0DJ07 73 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 S100A11P31949 105 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-202ENST00000524475 PLP1P60201 277 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 HBG1P69891 147 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 HBG2P69892 147 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 VWC2Q2TAL6 325 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 TEPPQ6URK8 271 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 LINC00322Q6ZN03 302 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-202ENST00000524475 PPP1R1CQ8WVI7 109 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 SELENOKQ9Y6D0 94 aa11.28□□□□□ -0.6
SF3B2-202ENST00000524475 IGSF23A1L1A6 192 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 H0YIZ8 118 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 S100A7P31151 101 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 RRAS2P62070 204 aaPredicted RBP11.27□□□□□ -0.61
SF3B2-202ENST00000524475 ATP6V1FQ16864 119 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 C1orf194Q5T5A4 169 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 ASB13Q8WXK3 278 aa11.27□□□□□ -0.61
SF3B2-202ENST00000524475 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 IGHV3-66A0A0C4DH42 116 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 CST7O76096 145 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 LYZP61626 148 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 BAXQ07812 192 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 OR2F1Q13607 317 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 SLC25A31Q9H0C2 315 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 TUBA4BQ9H853 241 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
SF3B2-202ENST00000524475 OR5AC2Q9NZP5 309 aa11.26□□□□□ -0.61
SF3B2-202ENST00000524475 MPC2O95563 127 aa11.25□□□□□ -0.61
SF3B2-202ENST00000524475 LRRC37A5PQ49AS3 106 aa11.25□□□□□ -0.61
SF3B2-202ENST00000524475 PXDC1Q5TGL8 231 aa11.25□□□□□ -0.61
SF3B2-202ENST00000524475 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-202ENST00000524475 ZNF546Q86UE3 836 aa11.25□□□□□ -0.61
SF3B2-202ENST00000524475 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms