RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PLP1P60201 277 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 STXBP6Q8NFX7 210 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 FAM103A1Q9BTL3 118 aaKnown RBP20.42■□□□□ 0.86
COL13A1-213ENST00000520267 UBTD1Q9HAC8 227 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 TRAV34A0A0B4J273 112 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 GNG5P63218 68 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 SSX2Q16385 188 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 LEMD1Q68G75 181 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 PSG1P11464 419 aa20.41■□□□□ 0.86
COL13A1-213ENST00000520267 HES1Q14469 280 aa20.41■□□□□ 0.86
COL13A1-213ENST00000520267 UNQ6494/PRO21346Q6UXR6 183 aa20.41■□□□□ 0.86
COL13A1-213ENST00000520267 DYNAPQ8N1N2 210 aa20.41■□□□□ 0.86
COL13A1-213ENST00000520267 OR1L6Q8NGR2 347 aa20.41■□□□□ 0.86
COL13A1-213ENST00000520267 ABCA1O95477 2261 aa20.41■□□□□ 0.86
COL13A1-213ENST00000520267 IBA57Q5T440 356 aaKnown RBP20.41■□□□□ 0.86
COL13A1-213ENST00000520267 ITLN2Q8WWU7 325 aaPredicted RBP20.41■□□□□ 0.86
COL13A1-213ENST00000520267 A0A1B0GUS0 222 aa20.39■□□□□ 0.86
COL13A1-213ENST00000520267 K7EIM0 57 aa20.39■□□□□ 0.86
COL13A1-213ENST00000520267 GP9P14770 177 aa20.39■□□□□ 0.86
COL13A1-213ENST00000520267 ASPHD1Q5U4P2 390 aa20.39■□□□□ 0.86
COL13A1-213ENST00000520267 C1orf122Q6ZSJ8 110 aa20.39■□□□□ 0.86
COL13A1-213ENST00000520267 A6NNC1 897 aa20.39■□□□□ 0.85
COL13A1-213ENST00000520267 NBEAP1P0C6P0 100 aa20.39■□□□□ 0.85
COL13A1-213ENST00000520267 HIST1H1BP16401 226 aaKnown RBP20.39■□□□□ 0.85
COL13A1-213ENST00000520267 LYZP61626 148 aa20.39■□□□□ 0.85
COL13A1-213ENST00000520267 MRPL18Q9H0U6 180 aaKnown RBP20.38■□□□□ 0.85
COL13A1-213ENST00000520267 TRAV20A0A0B4J274 112 aa20.38■□□□□ 0.85
COL13A1-213ENST00000520267 PGPA6NDG6 321 aa20.38■□□□□ 0.85
COL13A1-213ENST00000520267 HOXB4P17483 251 aaPredicted RBP20.38■□□□□ 0.85
COL13A1-213ENST00000520267 IER3P46695 156 aa20.38■□□□□ 0.85
COL13A1-213ENST00000520267 C5orf64Q2M2E5 130 aa20.38■□□□□ 0.85
COL13A1-213ENST00000520267 EPDR1Q9UM22 224 aa20.38■□□□□ 0.85
COL13A1-213ENST00000520267 HIGD1AQ9Y241 93 aa20.38■□□□□ 0.85
COL13A1-213ENST00000520267 C19orf84I3L1E1 186 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 SPINK4O60575 86 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 SLC25A5P05141 298 aaKnown RBP20.37■□□□□ 0.85
COL13A1-213ENST00000520267 RD3LP0DJH9 198 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 GNLYP22749 145 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 BAGE2Q86Y30 109 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 KIR3DL3Q8N743 410 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 RASL11BQ9BPW5 248 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 SERTAD4Q9NUC0 356 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 H3BTX0 84 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 IGKV1-17P01599 117 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 TCL1AP56279 114 aa20.37■□□□□ 0.85
COL13A1-213ENST00000520267 CX3CL1P78423 397 aa20.36■□□□□ 0.85
COL13A1-213ENST00000520267 TMEM256Q8N2U0 113 aa20.36■□□□□ 0.85
COL13A1-213ENST00000520267 ITPR1Q14643 2758 aa20.36■□□□□ 0.85
COL13A1-213ENST00000520267 KLF17Q5JT82 389 aaPredicted RBP20.36■□□□□ 0.85
COL13A1-213ENST00000520267 GBGT1Q8N5D6 347 aa20.36■□□□□ 0.85
COL13A1-213ENST00000520267 PRDM13Q9H4Q3 707 aa20.36■□□□□ 0.85
COL13A1-213ENST00000520267 SLC35B1P78383 322 aa20.35■□□□□ 0.85
COL13A1-213ENST00000520267 FAM168AQ92567 244 aa20.35■□□□□ 0.85
COL13A1-213ENST00000520267 GRIFINA4D1Z8 144 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 ZNF705GA8MUZ8 300 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-213ENST00000520267 SNURFLB1AK76 121 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 NUPR1O60356 82 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 TMEM183BQ1AE95 376 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 ZNF600Q6ZNG1 722 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 SGK494Q96LW2 274 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 SLC25A39Q9BZJ4 359 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-213ENST00000520267 SIRPDQ9H106 197 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 RPH3ALQ9UNE2 315 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 SMIM27A0A1W2PRY6 76 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 CA1P00915 261 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-213ENST00000520267 JOSD1Q15040 202 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-213ENST00000520267 DNLZQ5SXM8 178 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 TMEM18Q96B42 140 aa20.34■□□□□ 0.85
COL13A1-213ENST00000520267 RBM14Q96PK6 669 aaKnown RBP20.34■□□□□ 0.85
COL13A1-213ENST00000520267 EFNA4P52798 201 aa20.33■□□□□ 0.85
COL13A1-213ENST00000520267 CCDC144NLQ6NUI1 221 aa20.33■□□□□ 0.85
COL13A1-213ENST00000520267 MRPL27Q9P0M9 148 aaKnown RBP20.33■□□□□ 0.84
COL13A1-213ENST00000520267 NCBP2LA6PVI3 153 aaKnown RBP20.32■□□□□ 0.84
COL13A1-213ENST00000520267 GZMBP10144 247 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 UBE2G1P62253 170 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 Q8N6K4 173 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 GNB1LQ9BYB4 327 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 Q9H3A6 140 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 S4R3C0 116 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 NDPQ00604 133 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 MINOS1Q5TGZ0 78 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 MINOS1-NBL1R4GNA1 71 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 WNK2Q9Y3S1 2297 aa20.32■□□□□ 0.84
COL13A1-213ENST00000520267 ZNF562Q6V9R5 426 aa20.31■□□□□ 0.84
COL13A1-213ENST00000520267 FAM231DQ6ZW35 169 aa20.31■□□□□ 0.84
COL13A1-213ENST00000520267 TP53TG3Q9ULZ0 132 aa20.31■□□□□ 0.84
COL13A1-213ENST00000520267 KLF12Q9Y4X4 402 aa20.31■□□□□ 0.84
COL13A1-213ENST00000520267 TRBV9A0A0B4J1U6 114 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 OOSP1A8MZH6 123 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 NUDT10Q8NFP7 164 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 NUDT11Q96G61 164 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 C7orf69Q9H7B7 122 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 ZNF586Q9NXT0 402 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 PRR27Q6MZM9 219 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 C5orf17Q8NAS9 161 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 OR5R1Q8NH85 324 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 ARPC1AQ92747 370 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 MBD6Q96DN6 1003 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 FANCD2OSQ96PS1 177 aa20.3■□□□□ 0.84
COL13A1-213ENST00000520267 IGHV2-70DA0A0C4DH43 119 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 567 ms