RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 UBE2G1P62253 170 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 HCP5Q6MZN7 132 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 RNASEKQ6P5S7 137 aaKnown RBP13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 SPATA12Q7Z6I5 190 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 KIR3DL3Q8N743 410 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 URB1-AS1Q96HZ7 61 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 ZZEF1O43149 2961 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 PGPA6NDG6 321 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 CD24P25063 80 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 ZFP30Q9Y2G7 519 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 ZGRF1Q86YA3 2104 aa13.29□□□□□ -0.28
PCDHGA11-202ENST00000518882 APELAP0DMC3 54 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 Q56UQ5 140 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 IGFL3Q6UXB1 125 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 C11orf42Q8N5U0 333 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 TMEM186Q96B77 213 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 MLST8Q9BVC4 326 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 CTSZQ9UBR2 303 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 KLF12Q9Y4X4 402 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 IGHV3-21A0A0B4J1V1 117 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 IGHV3-72A0A0B4J1Y9 119 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 C2orf70A6NJV1 201 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 H3BTX0 84 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 LINC00614P0C842 121 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 Q6ZS92 163 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 OR2D3Q8NGH3 330 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 ZNF596Q8TC21 504 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 CCL17Q92583 94 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
PCDHGA11-202ENST00000518882 PPIAL4EA0A075B759 164 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 PPIAL4DF5H284 164 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 CRYABP02511 175 aaKnown RBP13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 PPIAL4FP0DN26 164 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 LEMD1Q68G75 181 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 TMEM108Q6UXF1 575 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 WFDC8Q8IUA0 241 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 PERPQ96FX8 193 aa13.27□□□□□ -0.28
PCDHGA11-202ENST00000518882 TACC2O95359 2948 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 TTC28Q96AY4 2481 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 SH2D7A6NKC9 451 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 M0QZ24 198 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 CRYGCP07315 174 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 NBEAP1P0C6P0 100 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 TSPOP30536 169 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 FAM71F2Q6NXP2 309 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 ATP5L2Q7Z4Y8 100 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 LINC00311Q8N616 119 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 KLHDC1Q8N7A1 406 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 GTSF1Q8WW33 167 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 GPR82Q96P67 336 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 CHRDL1Q9BU40 450 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 CLEC5AQ9NY25 188 aa13.27□□□□□ -0.29
PCDHGA11-202ENST00000518882 FAM87AP0C7U9 286 aa13.26□□□□□ -0.29
PCDHGA11-202ENST00000518882 DLX6P56179 175 aa13.26□□□□□ -0.29
PCDHGA11-202ENST00000518882 PMCHL1Q16048 86 aa13.26□□□□□ -0.29
PCDHGA11-202ENST00000518882 TNFRSF13BO14836 293 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 SIAH2O43255 324 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 GP9P14770 177 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 CNTFRP26992 372 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 LOXP28300 417 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 DLX1P56177 255 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 BSPH1Q075Z2 132 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 VMA21Q3ZAQ7 101 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 SSX8Q7RTT4 187 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 PRSS22Q9GZN4 317 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 GSX1Q9H4S2 264 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 RPP21Q9H633 154 aaKnown RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 ANKRD11Q6UB99 2663 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 NDUFB3O43676 98 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 IGLL1P15814 213 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 ZNF137PP52743 207 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 FOXA3P55318 350 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 FAM120AOSQ5T036 256 aa13.25□□□□□ -0.29
PCDHGA11-202ENST00000518882 TRAV9-2A0A087WT02 112 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 HINT1P49773 126 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 HBBP68871 147 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 LRRC10Q5BKY1 277 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 C8orf31Q8N9H6 132 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 TRGV9Q99603 122 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 C19orf71A6NCJ1 209 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 LTAP01374 205 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 THBDP07204 575 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 CA7P43166 264 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 PRB3Q04118 309 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 Q6ZVH6 145 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 FAM57AQ8TBR7 257 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 SMIM12Q96EX1 92 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 PGLYRP4Q96LB8 373 aa13.24□□□□□ -0.29
PCDHGA11-202ENST00000518882 A0A0G2JNJ9 132 aa13.23□□□□□ -0.29
PCDHGA11-202ENST00000518882 TOMM40O96008 361 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms