RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 USF1P22415 310 aaPredicted RBP2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 OMGP23515 440 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 OPRM1P35372 400 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 CCR2P41597 374 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 PSMB3P49720 205 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 APOC4P55056 127 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 CCL23P55773 120 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 TCL1AP56279 114 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 KRTDAPP60985 99 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 AESQ08117 197 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 PLCXD2Q0VAA5 305 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 POU2AF1Q16633 256 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 C5orf47Q569G3 176 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 PSMG4Q5JS54 123 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 C1orf140Q5VVS0 124 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 SLC25A34Q6PIV7 304 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 RASL11AQ6T310 242 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 LINC00336Q6ZUF6 198 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 LRP11Q86VZ4 500 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 BAGE3Q86Y29 109 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 BAGE2Q86Y30 109 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 SLC22A24Q8N4F4 322 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 TPRX1Q8N7U7 411 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 DCAF4L2Q8NA75 395 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 ZFP62Q8NB50 900 aaPredicted RBP2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF740Q8NDX6 193 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 MDS2Q8NDY4 140 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 OR2K2Q8NGT1 345 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 OR10X1Q8NGY0 326 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 OR10AC1Q8NH08 325 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 PPTC7Q8NI37 304 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 VSTM2AQ8TAG5 236 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 TMEM101Q96IK0 257 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 DERL1Q9BUN8 251 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 WDR61Q9GZS3 305 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 NAA60Q9H7X0 242 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 HES4Q9HCC6 221 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 GNG13Q9P2W3 67 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 RCL1Q9Y2P8 373 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 LSM5Q9Y4Y9 91 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 RFNGQ9Y644 331 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 HELZP42694 1942 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 RLFQ13129 1914 aa2.61□□□□□ -1.99
ECHDC1-217ENST00000488087 NUP210Q8TEM1 1887 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 MYO16Q9Y6X6 1858 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 COL4A2P08572 1712 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 TNS1Q9HBL0 1735 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 A0A0A6YYD5 115 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 A0A1W2PNU3 283 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 C7orf71A4D174 169 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF737O75373 536 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 FCN3O75636 299 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CA2P00918 260 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 HMGN2P05204 90 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CT45A6P0DMU7 189 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CT45A5P0DMU8 189 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CT45A7P0DMV0 189 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF17P17021 662 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 RPS15AP62244 130 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 SMAGPQ0VAQ4 97 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 UNC119Q13432 240 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 MPV17L2Q567V2 206 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CT45A1Q5HYN5 189 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 FAM78AQ5JUQ0 283 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CASC10Q5T4H9 136 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 FAM78BQ5VT40 261 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 Q6ZVH6 145 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 OR51A4Q8NGJ6 313 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 OR2AE1Q8NHA4 323 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 ATP6V0E2Q8NHE4 81 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 PFN4Q8NHR9 129 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CT45A3Q8NHU0 189 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 OTOSQ8NHW6 89 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 LSM10Q969L4 123 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 BORCS7Q96B45 105 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 GTSF1LQ9H1H1 148 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 OR2D2Q9H210 308 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 RPRMQ9NS64 109 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 IL36BQ9NZH7 164 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 NAT8BQ9UHF3 227 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 RABAC1Q9UI14 185 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CES1P1Q9UKY3 287 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 CYSLTR1Q9Y271 337 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 POLR1DQ9Y2S0 133 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 WASHC3Q9Y3C0 194 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 IER3IP1Q9Y5U9 82 aa2.6□□□□□ -1.99
ECHDC1-217ENST00000488087 MYO10Q9HD67 2058 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 TRAV27A0A087WT01 109 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 MUC21A0A0G2JKD1 596 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 CENPVL3A0A0U1RRI6 287 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 MUC21A0A140T8X8 626 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 CTXND1A0A1B0GTU2 59 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 A0A1B0GW15 77 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 A0A1W2PPM0 123 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 PINLYPA6NC86 204 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 C2orf70A6NJV1 201 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 SLC22A20A6NK97 555 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms