RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SLC25A4P12235 298 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 UCP1P25874 307 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 OPRK1P41145 380 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 HTR2BP41595 481 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 AKR1C2P52895 323 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 SPCS3P61009 180 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 YPEL3P61236 119 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-216ENST00000481048 LSM3P62310 102 aaKnown RBP4.67□□□□□ -1.66
LRCH3-216ENST00000481048 BSXQ3C1V8 233 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 LEMD1Q68G75 181 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 ETFRF1Q6IPR1 90 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 LINC00336Q6ZUF6 198 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 TRPT1Q86TN4 253 aaKnown RBP4.67□□□□□ -1.66
LRCH3-216ENST00000481048 SNX29P2Q8IUI4 249 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 CCDC71LQ8N9Z2 235 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 Q8NAQ8 132 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 AP3S1Q92572 193 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 TP53RKQ96S44 253 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 ABHD1Q96SE0 405 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 C1QTNF4Q9BXJ3 329 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-216ENST00000481048 COPZ2Q9P299 210 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 MTFP1Q9UDX5 166 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 RABAC1Q9UI14 185 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 APLNQ9ULZ1 77 aa4.67□□□□□ -1.66
LRCH3-216ENST00000481048 TRAV10A0A0B4J240 114 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 GSTZ1O43708 216 aaPredicted RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 CDS2O95674 445 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 IGKV1-17P01599 117 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 CD74P04233 296 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 CD3DP04234 171 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 GIG44P09565 113 aaPredicted RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 ELK1P19419 428 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 ETV6P41212 452 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 P2RY1P47900 373 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 HOXA1P49639 335 aaPredicted RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 TAS2R19P59542 299 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 SNRPD3P62318 126 aaKnown RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 DHODHQ02127 395 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 SSBP1Q04837 148 aaKnown RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 IZUMO4Q1ZYL8 232 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 TRIM16LQ309B1 348 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 C2orf83Q53S99 150 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 TMEM229BQ8NBD8 167 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 CSNK1G2-AS1Q8NCQ2 148 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 STXBP6Q8NFX7 210 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 OR1S2Q8NGQ3 325 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 RNASEH2CQ8TDP1 164 aaKnown RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 DCANP1Q8TF63 244 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 Q8WTZ3 238 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 RNF126Q9BV68 326 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 FUNDC2Q9BWH2 189 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 FNDC4Q9H6D8 234 aaPredicted RBP4.66□□□□□ -1.66
LRCH3-216ENST00000481048 KLK11Q9UBX7 282 aa4.66□□□□□ -1.66
LRCH3-216ENST00000481048 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 TEX13DA0A0J9YY54 714 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 FAM25AB3EWG3 89 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 FAM25CB3EWG5 89 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 FAM25GB3EWG6 89 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 DEFB4AO15263 64 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 HPGDSO60760 199 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 IGLC1P0CG04 106 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RBMY1A1P0DJD3 496 aaKnown RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RBMY1CP0DJD4 496 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 ZNF182P17025 639 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 NPY1RP25929 384 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 HLA-DMBP28068 263 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 NUP62P37198 522 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 ATP5IP56385 69 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 VBP1P61758 197 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 MRPS10P82664 201 aaKnown RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 DHRS2Q13268 280 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 MEF2DQ14814 521 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RBMY1FQ15415 496 aaKnown RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 SURF2Q15527 256 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 C4orf46Q504U0 113 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 SPINK9Q5DT21 86 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 C16orf54Q6UWD8 224 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 FAM24BQ8N5W8 94 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RNASE11Q8TAA1 199 aaKnown RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 GLYATL2Q8WU03 294 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 GLMPQ8WWB7 406 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RBPMSQ93062 196 aaKnown RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RAB40CQ96S21 281 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 TMEM222Q9H0R3 208 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RABL2AQ9UBK7 228 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-216ENST00000481048 TBC1D24Q9ULP9 559 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 RABL2BQ9UNT1 228 aa4.65□□□□□ -1.67
LRCH3-216ENST00000481048 IGHV4-4A0A075B6R2 117 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 PIGBOS1A0A0B4J2F0 54 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 IGHV3-66A0A0C4DH42 116 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 TEX48A0A1B0GUV7 120 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 TMEM189A5PLL7 270 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 SMIM9A6NGZ8 99 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 GABARAPH6UMI1 98 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 BUB3O43684 328 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 GABARAPO95166 117 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 RAB3DO95716 219 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 ZNF688P0C7X2 276 aa4.64□□□□□ -1.67
LRCH3-216ENST00000481048 P0DMU3 169 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms