RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 PRR20EP86478 221 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 PRR20CP86479 221 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 PRR20DP86480 221 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 PRR20BP86481 221 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 PRR20AP86496 221 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 CLINT1Q14677 625 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 SAMD5Q5TGI4 173 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 PATE2Q6UY27 113 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 ZNF546Q86UE3 836 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 DPF1Q92782 380 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 GGTLC1Q9BX51 225 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 SMIM3Q9BZL3 60 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 UQCC1Q9NVA1 299 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 GAR1Q9NY12 217 aaKnown RBP7.84□□□□□ -1.15
CASC3-204ENST00000474190 SIGLEC8Q9NYZ4 499 aa7.84□□□□□ -1.15
CASC3-204ENST00000474190 K7EMT4 169 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 AGPAT2O15120 278 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 ZNF207O43670 478 aaKnown RBP7.83□□□□□ -1.16
CASC3-204ENST00000474190 YIF1AO95070 293 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 C1QBP02746 253 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 RD3LP0DJH9 198 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 CRYBB3P26998 211 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 PLP1P60201 277 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 OR2F1Q13607 317 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 ATP6V1FQ16864 119 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 OXLD1Q5BKU9 147 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 BTNL8Q6UX41 500 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 CYP2G1PQ6ZSU1 146 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 AKAP14Q86UN6 197 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 STX12Q86Y82 276 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 ATP5SQ99766 215 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
CASC3-204ENST00000474190 VSIRQ9H7M9 311 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 MRPL27Q9P0M9 148 aaKnown RBP7.83□□□□□ -1.16
CASC3-204ENST00000474190 MLXQ9UH92 298 aa7.83□□□□□ -1.16
CASC3-204ENST00000474190 UBE2L5PA0A1B0GUS4 154 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 SMCO3A2RU48 225 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 IZUMO1RA6ND01 250 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 ZFP92A6NM28 416 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 G3V4G9 280 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 ARPC5O15511 151 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 IGLV1-51P01701 117 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 FOLR2P14207 255 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 CBLN1P23435 193 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 ELLP55199 621 aaPredicted RBP7.82□□□□□ -1.16
CASC3-204ENST00000474190 KRTAP10-11P60412 298 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 HBG1P69891 147 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 HBG2P69892 147 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 AKR1C1Q04828 323 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 RELQ04864 619 aaPredicted RBP7.82□□□□□ -1.16
CASC3-204ENST00000474190 OPCMLQ14982 345 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 LGALSLQ3ZCW2 172 aaPredicted RBP7.82□□□□□ -1.16
CASC3-204ENST00000474190 FAM106AQ4KMX7 169 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 MIC13Q5XKP0 118 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 FAM90A2PQ658T7 463 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 TEPPQ6URK8 271 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 KCNRGQ8N5I3 272 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 OR51G1Q8NGK1 321 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 TMEM37Q8WXS4 190 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 NPCDR1Q9BY65 106 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 PARD6GQ9BYG4 376 aaPredicted RBP7.82□□□□□ -1.16
CASC3-204ENST00000474190 ARV1Q9H2C2 271 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 SELENOKQ9Y6D0 94 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 DNAH9Q9NYC9 4486 aa7.82□□□□□ -1.16
CASC3-204ENST00000474190 IGHV7-4-1A0A0J9YVY3 117 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 ZNF320A2RRD8 509 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 CHEK1O14757 476 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 IL4P05112 153 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 RPL29P47914 159 aaKnown RBP7.81□□□□□ -1.16
CASC3-204ENST00000474190 EGFEM1PQ0D2K5 195 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 ZNF345Q14585 488 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 DEFB114Q30KQ6 69 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 GCSAMLQ5JQS6 135 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 KPRPQ5T749 579 aaPredicted RBP7.81□□□□□ -1.16
CASC3-204ENST00000474190 MORN5Q5VZ52 161 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 RPL7L1Q6DKI1 246 aaKnown RBP7.81□□□□□ -1.16
CASC3-204ENST00000474190 C9orf62Q8N4C0 152 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 BPIFCQ8NFQ6 507 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 ST8SIA2Q92186 375 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 RNF125Q96EQ8 232 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 RSG1Q9BU20 258 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 MFFQ9GZY8 342 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 DAZ1Q9NQZ3 744 aaKnown RBP7.81□□□□□ -1.16
CASC3-204ENST00000474190 SMPXQ9UHP9 88 aa7.81□□□□□ -1.16
CASC3-204ENST00000474190 IGHV3OR16-13A0A075B7E8 117 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 IGHV3-49A0A0A0MS15 119 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 IGHV3-74A0A0B4J1X5 117 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 SEC14L6B5MCN3 397 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 BUB3O43684 328 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 CD33P20138 364 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 FGF7P21781 194 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 CAMLGP49069 296 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 EIF2B2P49770 351 aaKnown RBP7.8□□□□□ -1.16
CASC3-204ENST00000474190 AP2S1P53680 142 aaPredicted RBP7.8□□□□□ -1.16
CASC3-204ENST00000474190 BEAN1Q3B7T3 259 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 Q8WTZ3 238 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 C20orf24Q9BUV8 137 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 UFC1Q9Y3C8 167 aa7.8□□□□□ -1.16
CASC3-204ENST00000474190 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms