RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SEC22AQ96IW7 307 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 LINC01587Q99440 93 aa6.93□□□□□ -1.3
HDAC3-203ENST00000467533 TRAV12-2A0A075B6T6 113 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 A8MTW9 85 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 ANKRD65E5RJM6 399 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 ISLRO14498 428 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 SCGNO76038 276 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 MYL9P24844 172 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 RND2P52198 227 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 TBCEQ15813 527 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-203ENST00000467533 LAIR2Q6ISS4 152 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 TMEM144Q7Z5S9 345 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 HOGA1Q86XE5 327 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 C10orf67Q8IYJ2 551 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 OR11H7Q8NGC8 314 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 MRGPRFQ96AM1 343 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 PDCD10Q9BUL8 212 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 ENY2Q9NPA8 101 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 PLCXD1Q9NUJ7 323 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 FKBP14Q9NWM8 211 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
HDAC3-203ENST00000467533 GAGE12BA1L429 117 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 PSCAO43653 123 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 GAGE7O76087 117 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 TOMM40O96008 361 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 C1QBP02746 253 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 GAGE12FP0CL80 117 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 GAGE12GP0CL81 117 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 GAGE12IP0CL82 117 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 RAB3BP20337 219 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 CBX5P45973 191 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
HDAC3-203ENST00000467533 HSPA13P48723 471 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 TAS2R60P59551 318 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 IZUMO4Q1ZYL8 232 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 GPR141Q7Z602 305 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 TMED4Q7Z7H5 227 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 C8orf59Q8N0T1 100 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-203ENST00000467533 TMEM256Q8N2U0 113 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 OR51G1Q8NGK1 321 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 PBDC1Q9BVG4 233 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 EHFQ9NZC4 300 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 PFDN2Q9UHV9 154 aa6.91□□□□□ -1.3
HDAC3-203ENST00000467533 SMIM30A4D0T7 59 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 INS-IGF2F8WCM5 200 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 GPR31O00270 319 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 RS1O15537 224 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.3
HDAC3-203ENST00000467533 IGKV1-39P01597 117 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 IGKV1D-39P04432 117 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 RD3LP0DJH9 198 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 PRB4P10163 310 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-203ENST00000467533 ELK1P19419 428 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 PSMB9P28065 219 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 CNN1P51911 297 aaKnown RBP6.9□□□□□ -1.3
HDAC3-203ENST00000467533 PHLDA2Q53GA4 152 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 PRSS54Q6PEW0 395 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 OR5AP2Q8NGF4 316 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
HDAC3-203ENST00000467533 C16orf92Q96LL3 132 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-203ENST00000467533 FXYD6Q9H0Q3 95 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 ACOT13Q9NPJ3 140 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 LY96Q9Y6Y9 160 aa6.9□□□□□ -1.3
HDAC3-203ENST00000467533 LRP2P98164 4655 aa6.9□□□□□ -1.31
HDAC3-203ENST00000467533 A0A0B4J293 547 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 ZNF98A6NK75 572 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 BOLA2-SMG1P6H3BVE0 249 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 RLN2P04090 185 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 SLC25A4P12235 298 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 ZNF182P17025 639 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-203ENST00000467533 UCP1P25874 307 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 KRTAP10-4P60372 401 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-203ENST00000467533 SUPT4H1P63272 117 aaKnown RBP6.89□□□□□ -1.31
HDAC3-203ENST00000467533 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 Q6ZSA8 131 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 DHRSXQ8N5I4 330 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 Q8N814 137 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
HDAC3-203ENST00000467533 LINC00467Q9BRT7 94 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 SLC25A39Q9BZJ4 359 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-203ENST00000467533 TMPRSS5Q9H3S3 457 aa6.89□□□□□ -1.31
HDAC3-203ENST00000467533 RRP15Q9Y3B9 282 aaKnown RBP6.89□□□□□ -1.31
HDAC3-203ENST00000467533 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 MEIS3P1A6NDR6 274 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 PTGES3LE9PB15 166 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 GNAO1P09471 354 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 PSG1P11464 419 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 S100GP29377 79 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 ETV6P41212 452 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 MEOX2P50222 304 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 IDNKQ5T6J7 187 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 OR8G2PQ6IF36 304 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 TBC1D26Q86UD7 250 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 LINC00612Q8N6U2 182 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms