RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RRAS2P62070 204 aaPredicted RBP10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 DLK1P80370 383 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 TMEM144Q7Z5S9 345 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 NARS2Q96I59 477 aaKnown RBP10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 VSIRQ9H7M9 311 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 MGAT4CQ9UBM8 478 aa10.9□□□□□ -0.66
SQSTM1-205ENST00000464493 IGHV3-66A0A0C4DH42 116 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 SMCO3A2RU48 225 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 FAM24AA6NFZ4 105 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 DEDDO75618 318 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 CD5P06127 495 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 ARL16Q0P5N6 197 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 LILRB2Q8N423 598 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 RNF125Q96EQ8 232 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 SPAG8Q99932 426 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 NEURL2Q9BR09 285 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 GGACTQ9BVM4 153 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 TMEM231Q9H6L2 316 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 NPVFQ9HCQ7 196 aa10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 LYRM2Q9NU23 88 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-205ENST00000464493 HNRNPCP07910 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 CD7P09564 240 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 OR2F1Q13607 317 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 LRRC37A5PQ49AS3 106 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 FAM90A2PQ658T7 463 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 TCF24Q7RTU0 167 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 RABAC1Q9UI14 185 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 U3KQE9 123 aa10.88□□□□□ -0.67
SQSTM1-205ENST00000464493 E5RGE8 158 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 DFFBO76075 338 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 CST7O76096 145 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 CFDP00746 253 aaPredicted RBP10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 IGHV4-30-4P0DP06 118 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 OXA1LQ15070 435 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 TMEM252Q8N6L7 170 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 GRAMD2BQ96HH9 432 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 B9D2Q9BPU9 175 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 MED28Q9H204 178 aa10.87□□□□□ -0.67
SQSTM1-205ENST00000464493 IGKV3-7A0A075B6H7 116 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 IGSF23A1L1A6 192 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 OR4C46A6NHA9 309 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 A8MZ25 164 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 OR11H12B2RN74 326 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 H0YIZ8 118 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 CXCL3P19876 107 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 S100A11P31949 105 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 P2RY1P47900 373 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 SULT1A1P50225 295 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 LYZP61626 148 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 RPL11P62913 178 aaKnown RBP10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 SLC38A11Q08AI6 406 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 TEPPQ6URK8 271 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 STX12Q86Y82 276 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 TMEM217Q8N7C4 229 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 BPIFCQ8NFQ6 507 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 TUBA4BQ9H853 241 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 OR5AC2Q9NZP5 309 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 PFDN2Q9UHV9 154 aa10.86□□□□□ -0.67
SQSTM1-205ENST00000464493 BUB3O43684 328 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 FRMD6-AS1P0C7T7 363 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 GATA2P23769 480 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 EIF2B2P49770 351 aaKnown RBP10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 TMEM182Q6ZP80 229 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 CYP2G1PQ6ZSU1 146 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 GBGT1Q8N5D6 347 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 DEFB125Q8N687 156 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 C19orf73Q9NVV2 129 aa10.85□□□□□ -0.67
SQSTM1-205ENST00000464493 DNASE2O00115 360 aaPredicted RBP10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 MPC2O95563 127 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 PET100P0DJ07 73 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 TFPI2P48307 235 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 SELENOTP62341 195 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 HBG1P69891 147 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 HBG2P69892 147 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 FCN2Q15485 313 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 RNF126Q9BV68 326 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 SLC25A31Q9H0C2 315 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
SQSTM1-205ENST00000464493 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 HELTA6NFD8 242 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 ORM2P19652 201 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 NUP62P37198 522 aaPredicted RBP10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 AP2S1P53680 142 aaPredicted RBP10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 NHLH2Q02577 135 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 ATP6V1FQ16864 119 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 WFDC3Q8IUB2 231 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 OR11H7Q8NGC8 314 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 GLMPQ8WWB7 406 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 PPP1R14BQ96C90 147 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 WFDC10AQ9H1F0 79 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 UQCC1Q9NVA1 299 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 UBQLN2Q9UHD9 624 aa10.83□□□□□ -0.68
SQSTM1-205ENST00000464493 COL7A1Q02388 2944 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms