RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 C2orf88Q9BSF0 95 aa5.88□□□□□ -1.47
CDC42BPA-208ENST00000442054 DERL1Q9BUN8 251 aa5.88□□□□□ -1.47
CDC42BPA-208ENST00000442054 QTRT1Q9BXR0 403 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-208ENST00000442054 IFI27L2Q9H2X8 130 aa5.88□□□□□ -1.47
CDC42BPA-208ENST00000442054 PXMP4Q9Y6I8 212 aa5.88□□□□□ -1.47
CDC42BPA-208ENST00000442054 CEBPZOSA8MTT3 80 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 K7EN84 100 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 PPP1R2P9O14990 202 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 NBR2O15453 112 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 IFNA10P01566 189 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 FABP4P15090 132 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 COMPP49747 757 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 MORN2Q502X0 79 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 DTD1Q8TEA8 209 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 C11orf52Q96A22 123 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 FAM103A1Q9BTL3 118 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 SMCO3A2RU48 225 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 FCN3O75636 299 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 DDTP30046 118 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 FAM3BP58499 235 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 GBGT1Q8N5D6 347 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 OR10G9Q8NGN4 311 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 OR10G7Q8NGN6 311 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 NCOR1P1Q9H4R4 102 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 CHTOPQ9Y3Y2 248 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 MARCH11A6NNE9 402 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 ITGB1BP1O14713 200 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 STAG3L2P0CL84 134 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 STAG3L3P0CL85 134 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 ELLP55199 621 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 PPP1R27Q86WC6 154 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 Q8N976 141 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 ZNF503Q96F45 646 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 SLC25A22Q9H936 323 aa5.87□□□□□ -1.47
CDC42BPA-208ENST00000442054 TRAV3A0A0B4J244 114 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 KIR2DL5BA0A0G2JN68 375 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 KIR2DL5BA0A0G2JPC4 375 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 RD3LP0DJH9 198 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 OPRK1P41145 380 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 ERHP84090 104 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 C17orf58Q2M2W7 97 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 Q6ZSV7 163 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 KIR2DL5AQ8N109 375 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 SMIM7Q9BQ49 75 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 HEYLQ9NQ87 328 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 MBP02144 154 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 ATP5G3P48201 142 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 PRR20EP86478 221 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 PRR20CP86479 221 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 PRR20DP86480 221 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 PRR20BP86481 221 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 PRR20AP86496 221 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 LY6G5BQ8NDX9 201 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 LINC01006Q8NI28 216 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 SCGB1C1Q8TD33 95 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 NOL4LQ96MY1 436 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 GGTLC1Q9BX51 225 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 LINC00869P0C866 280 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 FGF7P21781 194 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 CD1BP29016 333 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 RPL27AP46776 148 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 GALR1P47211 349 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 POU2AF1Q16633 256 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 RPEL1Q2QD12 228 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 Q56UQ5 140 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 PDZD11Q5EBL8 140 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 FFAR4Q5NUL3 377 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 MMD2Q8IY49 270 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 OR11H6Q8NGC7 330 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 OR4P4Q8NGL7 312 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 KCNIP2Q9NS61 270 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 TMEM14BQ9NUH8 114 aa5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 YTHDF2Q9Y5A9 579 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-208ENST00000442054 A0A0G2JLM5 398 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 PAGE4O60829 102 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 PSMB3P49720 205 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 SUB1P53999 127 aaKnown RBP eCLIP5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 SPCS3P61009 180 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 OR8G2PQ6IF36 304 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 ZNF48Q96MX3 618 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 HSD17B10Q99714 261 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 SAA2-SAA4A0A096LPE2 208 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 HMGB3O15347 200 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 SAA2P0DJI9 122 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 CEBPGP53567 150 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 CT45A1Q5HYN5 189 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 CT45A3Q8NHU0 189 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 CORO2AQ92828 525 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 SLC39A9Q9NUM3 307 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 TRAV41A0A0B4J266 112 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 GCGP01275 180 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 IGLV2-8P01709 118 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 AREGP15514 252 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 KIR2DS2P43631 304 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 MISP3Q96FF7 219 aa5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 TSSC4Q9Y5U2 329 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-208ENST00000442054 IGKV1OR2-108A0A075B7D4 117 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 SLC31A2O15432 143 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms