RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IKZF2Q9UKS7 526 aa3.28□□□□□ -1.88
HMGB3P5-201ENST00000428894 CENPVL3A0A0U1RRI6 287 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 KBTBD11-OT1A0A1B0GTJ5 212 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 A0A1W2PRD5 423 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 DHRS12A0PJE2 317 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 TMEM189A5PLL7 270 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 LRRC30A6NM36 301 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 CEACAM18A8MTB9 384 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 G3V3Q6 166 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 K7EIL1 84 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 K7EPK0 472 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 M0R2Z0 102 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 DCTN6O00399 190 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 SLC16A7O60669 478 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 FCN3O75636 299 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 HBZP02008 142 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 IFNW1P05000 195 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 HIST1H1CP16403 213 aaKnown RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 ALOX5APP20292 161 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 NFYBP25208 207 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 GUCA1AP43080 201 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR12D2P58182 307 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 FGF12P61328 243 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 RPL38P63173 70 aaKnown RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 HIST1H3AP68431 136 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 KIR2DS1Q14954 304 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR8B8Q15620 311 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 UBE2V2Q15819 145 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 MRPL2Q5T653 305 aaKnown RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 BCL2L15Q5TBC7 163 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 WDR25Q64LD2 544 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 GLT8D1Q68CQ7 371 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 TBPL2Q6SJ96 375 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 SLC22A24Q8N4F4 322 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 FAM71E2Q8N5Q1 922 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 FAM24BQ8N5W8 94 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 FER1L6-AS1Q8NA97 138 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 WFDC9Q8NEX5 89 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR11H7Q8NGC8 314 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR4K5Q8NGD3 323 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR52L1Q8NGH7 329 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR51G2Q8NGK0 314 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR10G9Q8NGN4 311 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 OR2G3Q8NGZ4 309 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 KIR2DL5BQ8NHK3 375 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 KLF14Q8TD94 323 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 GEMIN6Q8WXD5 167 aaKnown RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 DIRAS2Q96HU8 199 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 AP1S3Q96PC3 154 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 LYSTQ99698 3801 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 HIST1H2BLQ99880 126 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 VAMP8Q9BV40 100 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 ATG5Q9H1Y0 275 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 INPP5EQ9NRR6 644 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 UQCC1Q9NVA1 299 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 MRPL27Q9P0M9 148 aaKnown RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 U3KQK5 164 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 V9GYH0 126 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 DYNC2H1Q8NCM8 4307 aaKnown RBP3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 CSMD3Q7Z407 3707 aa3.27□□□□□ -1.89
HMGB3P5-201ENST00000428894 DNAH1Q9P2D7 4330 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 RYR2Q92736 4967 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 TENM2Q9NT68 2774 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 BORCS7-ASMTA0A0B4J1R7 106 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 TRAV38-1A0A0B4J264 116 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 IGHV1-69DA0A0B4J2H0 117 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 A0A1W2PRF3 423 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 A0A1W2PRM7 423 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 MCRIP1C9JLW8 97 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 MFNGO00587 321 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 LYPD3O95274 346 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 SOX14O95416 240 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 IGHV1-69P01742 117 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 APOA2P02652 100 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 MAS1P04201 325 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 C8orf88P0DMB2 117 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 PGAM2P15259 253 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 ADCYAP1P18509 176 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 GADD45AP24522 165 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 FGF9P31371 208 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 SLC25A1P53007 311 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 EMP1P54849 157 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 SLC35A2P78381 396 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 RUNX1Q01196 453 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 MFGE8Q08431 387 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 HSD52Q0P140 79 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 EIF2B1Q14232 305 aaKnown RBP3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 MEF2DQ14814 521 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 SSX1Q16384 188 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 HIST3H3Q16695 136 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 NSUN5P1Q3KNT7 163 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 TMEM97Q5BJF2 176 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 C9orf129Q5T035 196 aaKnown RBP3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 CASC10Q5T4H9 136 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 TNFAIP8L2Q6P589 184 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 HEPN1Q6WQI6 88 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 TIFABQ6ZNK6 161 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 ZCCHC23Q6ZST2 131 aa3.26□□□□□ -1.89
HMGB3P5-201ENST00000428894 NDUFA11Q86Y39 141 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms