RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TCF24Q7RTU0 167 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 C6orf201Q7Z4U5 140 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 DEFB128Q7Z7B8 93 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR10G6Q8NH81 332 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 MRPL30Q8TCC3 161 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SLC37A2Q8TED4 501 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM54Q969K7 222 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SLC35E1Q96K37 410 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 CIB3Q96Q77 187 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TP53RKQ96S44 253 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR2J1Q9GZK6 312 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 WDR61Q9GZS3 305 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PARP12Q9H0J9 701 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM60AQ9NP50 221 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM9BQ9NQ34 198 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 KCNIP2Q9NS61 270 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 RPRMQ9NS64 109 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PSG8Q9UQ74 426 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SNRNP200O75643 2136 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM131Q92545 1883 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 MPDZO75970 2070 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGLV3-12A0A075B6K2 115 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-8A0A087WSZ0 117 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-43A0A0B4J1Z2 117 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SPTY2D1-AS1A0A0U1RR47 76 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF816-ZNF321PA0A0X1KG74 233 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZFP92A6NM28 416 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CEBPZOSA8MTT3 80 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 H3BSH0 61 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 M0R135 149 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SSSCA1O60232 199 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 GYPAP02724 150 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CRYGDP07320 174 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SNRPCP09234 159 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 MMP7P09237 267 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SELEP16581 610 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CRYGSP22914 178 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PTGDSP41222 190 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 REG1BP48304 166 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 NDUFV3P56181 108 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 GNB2P62879 340 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 DEFB103AP81534 67 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 RUNX1Q01196 453 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 EDDM3AQ14507 147 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 NSDHLQ15738 373 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ADIRFQ15847 76 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 NNATQ16517 81 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PRSS8Q16651 343 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PLPPR5Q32ZL2 321 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SP6Q3SY56 376 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TPTE2P1Q5T6R2 138 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PVRIGQ6DKI7 326 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF880Q6PDB4 577 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 WDR82Q6UXN9 313 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM14EPQ6UXP3 125 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C12orf54Q6X4T0 127 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q6ZVH6 145 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q6ZVQ6 151 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 LINC01551Q86U37 167 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C17orf82Q86X59 251 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C11orf53Q8IXP5 236 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C1orf174Q8IYL3 243 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SUMF1Q8NBK3 374 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CMTM2Q8TAZ6 248 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 DNAJA3Q96EY1 480 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 BORCS8Q96FH0 119 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF799Q96GE5 643 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 RCHY1Q96PM5 261 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAM173AQ9BQD7 235 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAAP24Q9BTP7 215 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 VAMP8Q9BV40 100 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM147Q9BVK8 224 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 GNB1LQ9BYB4 327 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 HES7Q9BYE0 225 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 OCR1Q9BZK8 76 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 LIME1Q9H400 295 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF586Q9NXT0 402 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IDI2-AS1Q9NZ38 188 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 MRPL27Q9P0M9 148 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TAAR3PQ9P1P4 343 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR1A1Q9P1Q5 309 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 JPT1Q9UK76 154 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRAPPC1Q9Y5R8 145 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 YLPM1P49750 1951 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 FREM3P0C091 2139 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRAV30A0A087WSZ9 112 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF705FA8MVS1 300 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 C9JCJ5 164 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 FNDC10F2Z333 226 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 SMKR1H3BMG3 65 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 M0R1B8 84 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RER1O15258 196 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 PGLYRP1O75594 196 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CST7O76096 145 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR4A8P0C604 315 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR5G3P0C626 314 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms