RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 LRTM2Q8N967 370 aa11.15□□□□□ -0.62
CPNE1-208ENST00000414711 MITD1Q8WV92 249 aa11.15□□□□□ -0.62
CPNE1-208ENST00000414711 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 MARCH11A6NNE9 402 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-208ENST00000414711 KRASP01116 189 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 AKR1C2P52895 323 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 CADM3Q8N126 398 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 C12orf45Q8N5I9 185 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-208ENST00000414711 DMBX1Q8NFW5 382 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 RNASE11Q8TAA1 199 aaKnown RBP11.14□□□□□ -0.63
CPNE1-208ENST00000414711 ZNF503Q96F45 646 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 RRNAD1Q96FB5 475 aaKnown RBP11.14□□□□□ -0.63
CPNE1-208ENST00000414711 MS4A6AQ9H2W1 248 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
CPNE1-208ENST00000414711 C7orf66A4D0T2 115 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 NUPL2O15504 423 aaKnown RBP11.13□□□□□ -0.63
CPNE1-208ENST00000414711 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 G6PCP35575 357 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 EMP1P54849 157 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
CPNE1-208ENST00000414711 H2BFWTQ7Z2G1 175 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 ZNF414Q96IQ9 312 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 SEC22AQ96IW7 307 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 ALG5Q9Y673 324 aa11.13□□□□□ -0.63
CPNE1-208ENST00000414711 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 KNCNA6PVL3 124 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 SSNA1O43805 119 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 CD5P06127 495 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 HLA-GP17693 338 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 BTF3P20290 206 aaKnown RBP11.12□□□□□ -0.63
CPNE1-208ENST00000414711 Q6ZSN1 163 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 UBAC2Q8NBM4 344 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 LSM10Q969L4 123 aaKnown RBP11.12□□□□□ -0.63
CPNE1-208ENST00000414711 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 C17orf77Q96MU5 243 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 BET1LQ9NYM9 111 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
CPNE1-208ENST00000414711 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 A0A0B4J293 547 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 CYB5BO43169 146 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 SNAPC5O75971 98 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 LYZL2Q7Z4W2 148 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
CPNE1-208ENST00000414711 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 TEX48A0A1B0GUV7 120 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 DBX1A6NMT0 343 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 YIF1AO95070 293 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-208ENST00000414711 FGF2P09038 288 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 HOXB5P09067 269 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 OR2B8PP59922 312 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-208ENST00000414711 Q56UQ5 140 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 Q6ZNX1 250 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 PLA2G2DQ9UNK4 145 aa11.1□□□□□ -0.63
CPNE1-208ENST00000414711 TMEM189A5PLL7 270 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 UPK2O00526 184 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 ST8SIA3O43173 380 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 P0C879 139 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 RPL11P62913 178 aaKnown RBP11.09□□□□□ -0.63
CPNE1-208ENST00000414711 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 GGNBP1Q5YKI7 109 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 THOC7Q6I9Y2 204 aaKnown RBP11.09□□□□□ -0.63
CPNE1-208ENST00000414711 OR4A16Q8NH70 328 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 SCARB1Q8WTV0 552 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 MED28Q9H204 178 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 FKBP11Q9NYL4 201 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 DKK2Q9UBU2 259 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
CPNE1-208ENST00000414711 A0A1B0GU03 582 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 ADAP1O75689 374 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 SULT1A3P0DMM9 295 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 SULT1A4P0DMN0 295 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 SLC25A6P12236 298 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 FAM222AQ5U5X8 452 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 GPR146Q96CH1 333 aa11.08□□□□□ -0.64
CPNE1-208ENST00000414711 A0A0G2JRQ6 117 aa11.07□□□□□ -0.64
CPNE1-208ENST00000414711 KRTAP29-1A8MX34 341 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-208ENST00000414711 GOSR2O14653 212 aa11.07□□□□□ -0.64
CPNE1-208ENST00000414711 CTSGP08311 255 aa11.07□□□□□ -0.64
CPNE1-208ENST00000414711 SLC25A24Q6NUK1 477 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 2085.8 ms