RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 REC114Q7Z4M0 266 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 LINC00482Q8N8I6 264 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 TMEM190Q8WZ59 177 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 RCC1LQ96I51 464 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 C20orf24Q9BUV8 137 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 ARL6Q9H0F7 186 aa18.05■□□□□ 0.48
TSPAN4-203ENST00000397397 GATA2P23769 480 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 SELENOTP62341 195 aa18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 TMEM182Q6ZP80 229 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 BPIFCQ8NFQ6 507 aa18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 OR51G1Q8NGK1 321 aa18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 ARPC5LQ9BPX5 153 aa18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 SLC45A2Q9UMX9 530 aa18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 WNK1Q9H4A3 2382 aa18.04■□□□□ 0.48
TSPAN4-203ENST00000397397 KANTRA0A1W2PQU2 76 aa18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 LGALS9O00182 355 aa18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 OVOL1O14753 267 aa18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 RPL7L1Q6DKI1 246 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 GGTLC1Q9BX51 225 aa18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 NPCDR1Q9BY65 106 aa18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 PARD6GQ9BYG4 376 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 ZFAND3Q9H8U3 227 aa18.03■□□□□ 0.48
TSPAN4-203ENST00000397397 FBN3Q75N90 2809 aa18.02■□□□□ 0.48
TSPAN4-203ENST00000397397 BORCS7-ASMTA0A0B4J1R7 106 aa18.02■□□□□ 0.48
TSPAN4-203ENST00000397397 IL4P05112 153 aa18.02■□□□□ 0.48
TSPAN4-203ENST00000397397 NKX2-5P52952 324 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-203ENST00000397397 ZNF709Q8N972 641 aa18.02■□□□□ 0.48
TSPAN4-203ENST00000397397 UFC1Q9Y3C8 167 aa18.02■□□□□ 0.48
TSPAN4-203ENST00000397397 BCL2L11O43521 198 aa18.01■□□□□ 0.47
TSPAN4-203ENST00000397397 ZNF207O43670 478 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-203ENST00000397397 LYZP61626 148 aa18.01■□□□□ 0.47
TSPAN4-203ENST00000397397 OPCMLQ14982 345 aa18.01■□□□□ 0.47
TSPAN4-203ENST00000397397 OR9G4Q8NGQ1 327 aa18.01■□□□□ 0.47
TSPAN4-203ENST00000397397 PEMTQ9UBM1 199 aa18.01■□□□□ 0.47
TSPAN4-203ENST00000397397 WI2-2373I1.2A0A1W2PRP0 233 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 CFDP00746 253 aaPredicted RBP18■□□□□ 0.47
TSPAN4-203ENST00000397397 TM4SF20Q53R12 229 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 MIC13Q5XKP0 118 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 C9orf62Q8N4C0 152 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 RNF125Q96EQ8 232 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 GINS3Q9BRX5 216 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 PBDC1Q9BVG4 233 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 CYTL1Q9NRR1 136 aa18■□□□□ 0.47
TSPAN4-203ENST00000397397 C17orf112F2Z3M2 114 aa17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 LINC00869P0C866 280 aa17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 CD33P20138 364 aa17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 RPL29P47914 159 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 STPG3Q8N7X2 389 aa17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 HSD17B11Q8NBQ5 300 aa17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 RSG1Q9BU20 258 aa17.99■□□□□ 0.47
TSPAN4-203ENST00000397397 A8MWP6 167 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 JTBO76095 146 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 ELLP55199 621 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 USF2Q15853 346 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 DAZ1Q9NQZ3 744 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 PXMP4Q9Y6I8 212 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 TMEM213A2RRL7 107 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 K7EMT4 169 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 B2MP61769 119 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 PRR20EP86478 221 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 PRR20CP86479 221 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 PRR20DP86480 221 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 PRR20BP86481 221 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 PRR20AP86496 221 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 LAMTOR1Q6IAA8 161 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 ELOVL1Q9BW60 279 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 ZNF471Q9BX82 626 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 KCNIP2Q9NS61 270 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 SLC39A9Q9NUM3 307 aa17.98■□□□□ 0.47
TSPAN4-203ENST00000397397 C2orf70A6NJV1 201 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 BOLA2-SMG1P6H3BVE0 249 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 ORM2P19652 201 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 OR1B1Q8NGR6 318 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 METTL26Q96S19 204 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 DOK5Q9P104 306 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 RABAC1Q9UI14 185 aa17.97■□□□□ 0.47
TSPAN4-203ENST00000397397 EDN2P20800 178 aa17.96■□□□□ 0.47
TSPAN4-203ENST00000397397 NPPCP23582 126 aa17.96■□□□□ 0.47
TSPAN4-203ENST00000397397 ATP6V0CP27449 155 aa17.96■□□□□ 0.47
TSPAN4-203ENST00000397397 Q6ZRG5 221 aa17.96■□□□□ 0.47
TSPAN4-203ENST00000397397 RFNGQ9Y644 331 aa17.96■□□□□ 0.47
TSPAN4-203ENST00000397397 HYPMO75409 117 aa17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 CSN3P07498 182 aa17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 HNRNPCP07910 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 PLP1P60201 277 aa17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 IL34Q6ZMJ4 242 aa17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 WFDC9Q8NEX5 89 aa17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 TIMM9Q9Y5J7 89 aa17.95■□□□□ 0.46
TSPAN4-203ENST00000397397 IGHV3-49A0A0A0MS15 119 aa17.94■□□□□ 0.46
TSPAN4-203ENST00000397397 OR5G3P0C626 314 aa17.94■□□□□ 0.46
TSPAN4-203ENST00000397397 PXDC1Q5TGL8 231 aa17.94■□□□□ 0.46
TSPAN4-203ENST00000397397 TRRAPQ9Y4A5 3859 aa17.94■□□□□ 0.46
TSPAN4-203ENST00000397397 IGHV7-4-1A0A0J9YVY3 117 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 SEC14L6B5MCN3 397 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 COX7A2P2O60397 106 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 FOLR2P14207 255 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 C4BPBP20851 252 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 CBLN1P23435 193 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 CRYBB3P26998 211 aa17.93■□□□□ 0.46
TSPAN4-203ENST00000397397 FFAR4Q5NUL3 377 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms