RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 OR1L4Q8NGR5 311 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 GATAD1Q8WUU5 269 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 PFDN5Q99471 154 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 RNF2Q99496 336 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 TXN2Q99757 166 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 SMR3AQ99954 134 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 TMEM160Q9NX00 188 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 DNASE2O00115 360 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 HMGB3O15347 200 aaKnown RBP16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 EIF3GO75821 320 aaKnown RBP eCLIP16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 Q6ZS46 218 aa16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 SUN5Q8TC36 379 aa16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 SEPSECSQ9HD40 501 aaKnown RBP16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 DNAJC4Q9NNZ3 241 aa16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 LINC00527Q9UJ94 153 aa16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 FUT9Q9Y231 359 aa16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TLN2Q9Y4G6 2542 aa16.39■□□□□ 0.21
MAP1LC3A-201ENST00000360668 H3BUA1 57 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 CXorf1O96002 111 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 IGKV1-17P01599 117 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 PPIFP30405 207 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TIGITQ495A1 244 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TMEM37Q8WXS4 190 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TXNDC17Q9BRA2 123 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 MRPL32Q9BYC8 188 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 F8W735 103 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 GNG7O60262 68 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 COX7A2P2O60397 106 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 PLP1P60201 277 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 C15orf32Q32M92 178 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 FAM78BQ5VT40 261 aa16.38■□□□□ 0.21
MAP1LC3A-201ENST00000360668 ELOA3CA0A087WX78 387 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 FAM223BA6NKX1 122 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 SCGB2A1O75556 95 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 MEF2BQ02080 365 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 Q56UQ5 140 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 SPATA31B1PQ5VZV4 182 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 FAM223AQ8IWN6 122 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 ZNF502Q8TBZ5 544 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 NOL4LQ96MY1 436 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 NPFFR1Q9GZQ6 430 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 S4R3C0 116 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 MXRA5Q9NR99 2828 aa16.37■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TMEM250H0YL14 139 aa16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 PSG1P11464 419 aa16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 YPEL3P61236 119 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 SCGB2A2Q13296 93 aa16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 C10orf113Q5VZT2 155 aa16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 PRSS22Q9GZN4 317 aa16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TMPRSS5Q9H3S3 457 aa16.36■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TOMM40O96008 361 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 RD3LP0DJH9 198 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 PATE2Q6UY27 113 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 MIR17HGQ75NE6 70 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 CYB561D1Q8N8Q1 229 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 EEF1AKMT3Q96AZ1 226 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 GAR1Q9NY12 217 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TECRQ9NZ01 308 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3A-201ENST00000360668 HYPMO75409 117 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 ARL14EPLP0DKL9 152 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 RIPPLY3P57055 190 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TAS2R45P59539 299 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 CFHR3Q02985 330 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 RHEBQ15382 184 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 ATP6V0BQ99437 205 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 DOK5Q9P104 306 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 TRBV7-1A0A0A6YYK4 115 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 IGHV3-23P01764 117 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 CD81P60033 236 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 ATP5G2Q06055 141 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 FAM74A3Q4VXF1 159 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 OR51G1Q8NGK1 321 aa16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 ANK3Q12955 4377 aaKnown RBP16.34■□□□□ 0.21
MAP1LC3A-201ENST00000360668 H3BQ15 152 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 LY6G6DO95868 133 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 IGLV1-40P01703 118 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 TRGV3P03979 118 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 C8orf88P0DMB2 117 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 ORM2P19652 201 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 FAM90A2PQ658T7 463 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 IQCF2Q8IXL9 164 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 OR1B1Q8NGR6 318 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 NIPSNAP3BQ9BS92 247 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 TUBA4BQ9H853 241 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 ZNF702PQ9H963 129 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 ARL2-SNX15V9GYD0 113 aa16.33■□□□□ 0.2
MAP1LC3A-201ENST00000360668 OR2T8A6NH00 312 aa16.32■□□□□ 0.2
MAP1LC3A-201ENST00000360668 PQLC2Q6ZP29 291 aa16.32■□□□□ 0.2
MAP1LC3A-201ENST00000360668 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3A-201ENST00000360668 TVP23CQ96ET8 276 aa16.32■□□□□ 0.2
MAP1LC3A-201ENST00000360668 USMG5Q96IX5 58 aa16.32■□□□□ 0.2
MAP1LC3A-201ENST00000360668 SMCO4Q9NRQ5 59 aa16.32■□□□□ 0.2
MAP1LC3A-201ENST00000360668 SONP18583 2426 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3A-201ENST00000360668 C7orf77A4D0Y5 90 aa16.31■□□□□ 0.2
MAP1LC3A-201ENST00000360668 FAM74A7A6NL05 159 aa16.31■□□□□ 0.2
MAP1LC3A-201ENST00000360668 NUPL2O15504 423 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3A-201ENST00000360668 PAGE4O60829 102 aa16.31■□□□□ 0.2
MAP1LC3A-201ENST00000360668 CTSGP08311 255 aa16.31■□□□□ 0.2
MAP1LC3A-201ENST00000360668 GCHFRP30047 84 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms