RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FAM24BQ8N5W8 94 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 RNF2Q99496 336 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 MEGF9Q9H1U4 602 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 AURKAIP1Q9NWT8 199 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 G3V318 75 aa17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 NDUFB8O95169 186 aa17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 UBE2L3P68036 154 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 PNRC1Q12796 327 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 SGMS2Q8NHU3 365 aa17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 HELZ2Q9BYK8 2649 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 ELOA3CA0A087WX78 387 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 ZNF98A6NK75 572 aa17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 HYPMO75409 117 aa17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 Q5PR19 223 aa17.62■□□□□ 0.41
PDLIM2-203ENST00000339162 PGPEP1LA6NFU8 196 aa17.61■□□□□ 0.41
PDLIM2-203ENST00000339162 J3QKU1 62 aa17.61■□□□□ 0.41
PDLIM2-203ENST00000339162 RPL23P62829 140 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-203ENST00000339162 URGCP-MRPS24S4R325 110 aa17.61■□□□□ 0.41
PDLIM2-203ENST00000339162 F6UZH7 168 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 H3BUX3 64 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 AMY1AP04745 511 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 RD3LP0DJH9 198 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 FOLR2P14207 255 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 ZNF343Q6P1L6 599 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 PAXXQ9BUH6 204 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 MDFIC2A0A1B0GVS7 189 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 C15orf54Q8N8G6 183 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 HIST1H2BAQ96A08 127 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 LINC00527Q9UJ94 153 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 MOB4Q9Y3A3 225 aa17.6■□□□□ 0.41
PDLIM2-203ENST00000339162 GNG7O60262 68 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 RPL35P42766 123 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 AKR1D1P51857 326 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 RNF212Q495C1 297 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 TXNDC17Q9BRA2 123 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 OR51M1Q9H341 326 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 TUBA4BQ9H853 241 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 BEX4Q9NWD9 120 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 A0A087WWC5 75 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 GGTLC3B5MD39 225 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 Q56UQ5 140 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 FBXL7Q9UJT9 491 aa17.59■□□□□ 0.41
PDLIM2-203ENST00000339162 TRBV20OR9-2A0A075B6H5 130 aa17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 F8W735 103 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 NDUFS6O75380 124 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 GATA3P23771 443 aa17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 SUMO1P63165 101 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 C9orf152Q5JTZ5 239 aa17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 C16orf82Q7Z2V1 217 aa17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 C21orf62Q9NYP8 219 aa17.58■□□□□ 0.4
PDLIM2-203ENST00000339162 PCP4L1A6NKN8 68 aa17.57■□□□□ 0.4
PDLIM2-203ENST00000339162 B4DEV8 164 aa17.57■□□□□ 0.4
PDLIM2-203ENST00000339162 MFAP4P55083 255 aa17.57■□□□□ 0.4
PDLIM2-203ENST00000339162 THYN1Q9P016 225 aa17.57■□□□□ 0.4
PDLIM2-203ENST00000339162 FXYD5Q96DB9 178 aa17.57■□□□□ 0.4
PDLIM2-203ENST00000339162 HIGD1AQ9Y241 93 aa17.57■□□□□ 0.4
PDLIM2-203ENST00000339162 HNF1AP20823 631 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 CRYBB3P26998 211 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 PLP1P60201 277 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 LOXL1Q08397 574 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 BCL6BQ8N143 479 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 FAM110DQ8TAY7 271 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 Q96MF0 132 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 OR2T8A6NH00 312 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 BLNKQ8WV28 456 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 MS4A10Q96PG2 267 aa17.56■□□□□ 0.4
PDLIM2-203ENST00000339162 H3BTX0 84 aa17.55■□□□□ 0.4
PDLIM2-203ENST00000339162 C12orf57Q99622 126 aa17.55■□□□□ 0.4
PDLIM2-203ENST00000339162 IL4P05112 153 aa17.55■□□□□ 0.4
PDLIM2-203ENST00000339162 LINC01551Q86U37 167 aa17.55■□□□□ 0.4
PDLIM2-203ENST00000339162 YPEL4Q96NS1 127 aa17.55■□□□□ 0.4
PDLIM2-203ENST00000339162 SLC25A39Q9BZJ4 359 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-203ENST00000339162 A0A1W2PRE2 83 aa17.54■□□□□ 0.4
PDLIM2-203ENST00000339162 IGHV4-31P0DP07 118 aa17.54■□□□□ 0.4
PDLIM2-203ENST00000339162 C15orf32Q32M92 178 aa17.54■□□□□ 0.4
PDLIM2-203ENST00000339162 ZNF491Q8N8L2 437 aa17.54■□□□□ 0.4
PDLIM2-203ENST00000339162 C2CD4CQ8TF44 421 aa17.54■□□□□ 0.4
PDLIM2-203ENST00000339162 PSMG3-AS1Q96PY0 264 aa17.54■□□□□ 0.4
PDLIM2-203ENST00000339162 MT-ND4LP03901 98 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 RHOGP84095 191 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 ELOBQ15370 118 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 LRRC75A-AS1Q8N1F1 130 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 Q8WTZ3 238 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 ELOVL1Q9BW60 279 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 ARL2-SNX15V9GYD0 113 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 CREBBPQ92793 2442 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 CR1P17927 2039 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 TOMM40O96008 361 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 RAB5BP61020 215 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 RANP62826 216 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 RNF125Q96EQ8 232 aa17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 MRPL27Q9P0M9 148 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-203ENST00000339162 TEX15Q9BXT5 2789 aa17.52■□□□□ 0.4
PDLIM2-203ENST00000339162 IGHV3-35A0A0C4DH35 117 aa17.52■□□□□ 0.4
PDLIM2-203ENST00000339162 A6NDX4 124 aa17.52■□□□□ 0.4
PDLIM2-203ENST00000339162 CTAG1AP78358 180 aa17.52■□□□□ 0.4
PDLIM2-203ENST00000339162 ZFP82Q8N141 532 aa17.52■□□□□ 0.4
PDLIM2-203ENST00000339162 C11orf52Q96A22 123 aa17.52■□□□□ 0.4
PDLIM2-203ENST00000339162 ZNF469Q96JG9 3925 aaPredicted RBP17.52■□□□□ 0.39
PDLIM2-203ENST00000339162 FABP1P07148 127 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms