RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PATE2Q6UY27 113 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ORMDL3Q8N138 153 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 SIGMAR1Q99720 223 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF576Q9H609 170 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 IGLV1-44P01699 117 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 CSN3P07498 182 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 LYRM7Q5U5X0 104 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF788Q6ZQV5 615 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF493Q6ZR52 646 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 MOB3BQ86TA1 216 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 MDS2Q8NDY4 140 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 HIGD1AQ9Y241 93 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 URB1O60287 2271 aaKnown RBP3.86□□□□□ -1.79
PTPN13-201ENST00000316707 LRP4O75096 1905 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 FTH1P19P0C7X4 201 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 MAP1BP46821 2468 aaKnown RBP3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF137PP52743 207 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 CACNA1DQ01668 2161 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 TMUB1Q9BVT8 246 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 KIR2DL2P43627 348 aaPredicted RBP3.86□□□□□ -1.79
PTPN13-201ENST00000316707 TAL2Q16559 108 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ITLN1Q8WWA0 313 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 THYN1Q9P016 225 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 MYO7BQ6PIF6 2116 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF883P0CG24 379 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 RPL7P18124 248 aaKnown RBP3.86□□□□□ -1.79
PTPN13-201ENST00000316707 NEGR1Q7Z3B1 354 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ERASQ7Z444 233 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00311Q8N616 119 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 C8orf46Q8TAG6 207 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 SIGLEC8Q9NYZ4 499 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 PROCRQ9UNN8 238 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ESPL1Q14674 2120 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 A0A1W2PPM0 123 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SCGB2A1O75556 95 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 IGHG3P01860 377 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 C17orf58Q2M2W7 97 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 DHRS13Q6UX07 377 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 C2orf91Q6ZV80 131 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 MOGAT3Q86VF5 341 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 ZNRF1Q8ND25 227 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 Q9H3A6 140 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 PRR33A8MZF0 331 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 ORM2P19652 201 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 IGFBP4P22692 258 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 PRELID3AQ96N28 172 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SPRY4Q9C004 299 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 DEFB127Q9H1M4 99 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 CD300EQ496F6 205 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 FNDC4Q9H6D8 234 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 ACP1P24666 158 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 RPL27AP46776 148 aaKnown RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 CNEP1R1Q8N9A8 125 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 GTSF1Q8WW33 167 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SRSF12Q8WXF0 261 aaKnown RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 IFI27L1Q96BM0 104 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 VGLL1Q99990 258 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 R4GN57 208 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 VSTM5A8MXK1 200 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 F8W1H4 67 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 THBDP07204 575 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 GP9P14770 177 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 CCL11P51671 97 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 PEAR1Q5VY43 1037 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 C16orf54Q6UWD8 224 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF833PQ6ZTB9 187 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF784Q8NCA9 323 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SLC25A39Q9BZJ4 359 aaPredicted RBP3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SIT1Q9Y3P8 196 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 IGHV3-7P01780 117 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 GNG5P63218 68 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 WT1-ASQ06250 92 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SAMD5Q5TGI4 173 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 FAM104BQ5XKR9 115 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00173Q6ZV60 143 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
PTPN13-201ENST00000316707 MYO9BQ13459 2157 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 IGLV3-9A0A075B6K5 115 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 HLA-DRB4P13762 266 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 VHLLQ6RSH7 139 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 NXT2Q9NPJ8 142 aaKnown RBP3.84□□□□□ -1.79
PTPN13-201ENST00000316707 DKK4Q9UBT3 224 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 HLA-DRB4X5D2U9 266 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 UQCRFS1P47985 274 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 PDE6HQ13956 83 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF841Q6ZN19 808 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 ARPC1AQ92747 370 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 TRAV17A0A0B4J275 112 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 H0Y8G0 127 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 LHBP01229 141 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 IGKV1-16P04430 117 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 FGF6P10767 208 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 SRSF6Q13247 344 aaKnown RBP3.84□□□□□ -1.79
PTPN13-201ENST00000316707 C3orf36Q3SXR2 165 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 UBALD2Q8IYN6 164 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 VCX2Q9H322 139 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 KIAA2026Q5HYC2 2103 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 CACNG7P62955 275 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 CLEC2AQ6UVW9 174 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 ADAMTSL5Q6ZMM2 481 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms