RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 OR2J3O76001 311 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 TBC1D28Q2M2D7 210 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 RASL11AQ6T310 242 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 IGLV3-12A0A075B6K2 115 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 TIMM8AO60220 97 aaPredicted RBP8.3□□□□□ -1.08
CLDN1-201ENST00000295522 MOSP00540 346 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 SP9P0CG40 484 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 KRTAP27-1Q3LI81 207 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 UBALD2Q8IYN6 164 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 FAM169BQ8N8A8 192 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 OR2Z1Q8NG97 314 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 WIPF2Q8TF74 440 aaPredicted RBP8.3□□□□□ -1.08
CLDN1-201ENST00000295522 SRSF12Q8WXF0 261 aaKnown RBP8.3□□□□□ -1.08
CLDN1-201ENST00000295522 LOXL2Q9Y4K0 774 aa8.3□□□□□ -1.08
CLDN1-201ENST00000295522 SMAD7O15105 426 aaKnown RBP8.29□□□□□ -1.08
CLDN1-201ENST00000295522 FAM106CPP0CH98 169 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 FAM106AQ4KMX7 169 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 CCDC144NLQ6NUI1 221 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 LINC00322Q6ZN03 302 aaPredicted RBP8.29□□□□□ -1.08
CLDN1-201ENST00000295522 RNF138Q8WVD3 245 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 C9orf172C9J069 976 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 CRXO43186 299 aaPredicted RBP8.29□□□□□ -1.08
CLDN1-201ENST00000295522 IFI27P40305 119 aaPredicted RBP8.29□□□□□ -1.08
CLDN1-201ENST00000295522 CIARTQ8N365 385 aaPredicted RBP8.29□□□□□ -1.08
CLDN1-201ENST00000295522 GTSF1Q8WW33 167 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 TET2Q6N021 2002 aaPredicted RBP8.29□□□□□ -1.08
CLDN1-201ENST00000295522 PCNX2A6NKB5 2137 aa8.29□□□□□ -1.08
CLDN1-201ENST00000295522 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 PROP1O75360 226 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 RBPMS2Q6ZRY4 209 aaKnown RBP8.28□□□□□ -1.08
CLDN1-201ENST00000295522 DEFB108BQ8NET1 73 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 NPIPB3Q92617 1050 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 ZNF414Q96IQ9 312 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
CLDN1-201ENST00000295522 B3GALT5-AS1P59052 145 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 SSBP2P81877 361 aaPredicted RBP8.28□□□□□ -1.08
CLDN1-201ENST00000295522 ZNF146Q15072 292 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 ATP5L2Q7Z4Y8 100 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 PPP1R32Q7Z5V6 425 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 ZNF329Q86UD4 541 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 ZNRF1Q8ND25 227 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 ZNF747Q9BV97 191 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
CLDN1-201ENST00000295522 CACNA1GO43497 2377 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 PRSS46E5RG02 174 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 CYC1P08574 325 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 MAGEA5P43359 124 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 FXYD2P54710 66 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 LOXL1Q08397 574 aaPredicted RBP8.28□□□□□ -1.08
CLDN1-201ENST00000295522 LPAL2Q16609 132 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 LINC01545Q5VT33 79 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 GPR82Q96P67 336 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 SLC25A2Q9BXI2 301 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 HES7Q9BYE0 225 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 WDFY4Q6ZS81 3184 aa8.28□□□□□ -1.08
CLDN1-201ENST00000295522 IGHV1-45A0A0A0MS14 117 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 PINLYPA6NC86 204 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 DNPH1O43598 174 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 LYZL6O75951 148 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 CCL4P13236 92 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 TDHQ8IZJ6 230 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 SMRP1Q8NCR6 262 aa8.27□□□□□ -1.08
CLDN1-201ENST00000295522 NKX2-8O15522 239 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 PRSS1P07477 247 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 APOBEC3AP31941 199 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CYB561P49447 251 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 RNFT1Q5M7Z0 435 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 UTF1Q5T230 341 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 WDR31Q8NA23 367 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-201ENST00000295522 A0A1W2PQM1 296 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CT45A6P0DMU7 189 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CT45A5P0DMU8 189 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CT45A7P0DMV0 189 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 COX6A1P12074 109 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CFHR2P36980 270 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 FOLR3P41439 243 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 INSL3P51460 131 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 ZNF134P52741 427 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CT45A1Q5HYN5 189 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 ABHD17BQ5VST6 288 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 C17orf82Q86X59 251 aaPredicted RBP8.27□□□□□ -1.09
CLDN1-201ENST00000295522 OR1L4Q8NGR5 311 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 ZNF576Q9H609 170 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 ZNRD1Q9P1U0 126 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 EPDR1Q9UM22 224 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 POLEQ07864 2286 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 WNK2Q9Y3S1 2297 aa8.27□□□□□ -1.09
CLDN1-201ENST00000295522 LRP4O75096 1905 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 IGHV5-10-1A0A0J9YXX1 117 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 MGST3O14880 152 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 REG1BP48304 166 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 TMPRSS3P57727 454 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 INO80CQ6PI98 192 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms