RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PVRIGQ6DKI7 326 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 BAGE2Q86Y30 109 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 TSTD3H0UI37 97 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 CNIH1O95406 144 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 CX3CL1P78423 397 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 ZNF664Q8N3J9 261 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 C8orf46Q8TAG6 207 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 NAT8BQ9UHF3 227 aa14.62□□□□□ -0.07
SHKBP1-201ENST00000291842 PGPA6NDG6 321 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 HYPMO75409 117 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 UCNP55089 124 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 LINC00310P59036 64 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 CMTM2Q8TAZ6 248 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 FAM103A1Q9BTL3 118 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 NCOR2Q9Y618 2525 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 SERF1AO75920 110 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 SLC25A5P05141 298 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 DDTP30046 118 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 TAS2R60P59551 318 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 FBLN7Q53RD9 439 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 WNT10AQ9GZT5 417 aa14.61□□□□□ -0.07
SHKBP1-201ENST00000291842 RBP4P02753 201 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 LYZP61626 148 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 TPTE2P1Q5T6R2 138 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 LY6G5BQ8NDX9 201 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 MED13LQ71F56 2210 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 SCGB1D1O95968 90 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 NBEAP1P0C6P0 100 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 PSG1P11464 419 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 HTR1DP28221 377 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 NHLH1Q02575 133 aa14.6□□□□□ -0.07
SHKBP1-201ENST00000291842 MYCNOSP40205 109 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 BAGE3Q86Y29 109 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 TIMD4Q96H15 378 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 C14orf144Q96I85 54 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 MS4A10Q96PG2 267 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 GNB1LQ9BYB4 327 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 CBLN4Q9NTU7 201 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 SMIM27A0A1W2PRY6 76 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 TMEM136Q6ZRR5 245 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 EPDR1Q9UM22 224 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 S4R3C0 116 aa14.59□□□□□ -0.07
SHKBP1-201ENST00000291842 CORTO00230 105 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 I3L2K1 104 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 IGLC1P0CG04 106 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 PRB4P10163 310 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 UBE2G1P62253 170 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 HES1Q14469 280 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 KLF17Q5JT82 389 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 NUDT10Q8NFP7 164 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 STXBP6Q8NFX7 210 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 NUDT11Q96G61 164 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 DPM3Q9P2X0 92 aa14.58□□□□□ -0.08
SHKBP1-201ENST00000291842 WNK2Q9Y3S1 2297 aa14.57□□□□□ -0.08
SHKBP1-201ENST00000291842 LOC105371242A0A075B767 164 aa14.57□□□□□ -0.08
SHKBP1-201ENST00000291842 GP9P14770 177 aa14.57□□□□□ -0.08
SHKBP1-201ENST00000291842 GNB4Q9HAV0 340 aa14.57□□□□□ -0.08
SHKBP1-201ENST00000291842 GATCO43716 136 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 TOX4O94842 621 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 C11orf71Q6IPW1 123 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 HIGD1AQ9Y241 93 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 NDUFS7O75251 213 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 LY6DQ14210 128 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 SSX2Q16385 188 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 PRR31Q5SQ13 230 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 ZNF600Q6ZNG1 722 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 RASL11BQ9BPW5 248 aa14.56□□□□□ -0.08
SHKBP1-201ENST00000291842 TRBV9A0A0B4J1U6 114 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 A0A1W2PPR1 153 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 NBR2O15453 112 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 IQCJQ1A5X6 159 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 OR11H6Q8NGC7 330 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 CFHR4Q92496 578 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 AMY1AP04745 511 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 CDKN1AP38936 164 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 TMEM183BQ1AE95 376 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 WDR73Q6P4I2 378 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 Q6ZWC4 215 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 Q9H3A6 140 aa14.55□□□□□ -0.08
SHKBP1-201ENST00000291842 IZUMO1RA6ND01 250 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 FOSL1P15407 271 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 RPL19P84098 196 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 RNF5Q99942 180 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 SLC25A39Q9BZJ4 359 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 HIVEP3Q5T1R4 2406 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 K7EIM0 57 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 IGKV1-17P01599 117 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 TPPP2P59282 170 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 MBD6Q96DN6 1003 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 AKAP6Q13023 2319 aa14.54□□□□□ -0.08
SHKBP1-201ENST00000291842 A8MWP6 167 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 PLP1P60201 277 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 LINC00322Q6ZN03 302 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 DYNAPQ8N1N2 210 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 HSPB9Q9BQS6 159 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 SAMD10Q9BYL1 202 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 C7orf69Q9H7B7 122 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 NAGKQ9UJ70 344 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 BMPR1BO00238 502 aa14.53□□□□□ -0.08
SHKBP1-201ENST00000291842 MT-ND6P03923 174 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms