RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C2orf70A6NJV1 201 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 C1QBP02746 253 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 CSN3P07498 182 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 CYP2G1PQ6ZSU1 146 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 MGST2Q99735 147 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 NEURL2Q9BR09 285 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 GINS3Q9BRX5 216 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 ELOVL1Q9BW60 279 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 GPR61Q9BZJ8 451 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 SLC45A2Q9UMX9 530 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 UBE2L5PA0A1B0GUS4 154 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 AGPAT2O15120 278 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 PLP1P60201 277 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 OR2F1Q13607 317 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 CLINT1Q14677 625 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 BTNL8Q6UX41 500 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 RNF125Q96EQ8 232 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 WDR61Q9GZS3 305 aaKnown RBP10.72□□□□□ -0.69
VPS25-201ENST00000253794 MRPL27Q9P0M9 148 aaKnown RBP10.72□□□□□ -0.69
VPS25-201ENST00000253794 FBXL17Q9UF56 701 aa10.72□□□□□ -0.69
VPS25-201ENST00000253794 DNAH3Q8TD57 4116 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 ZNF320A2RRD8 509 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 SEC14L6B5MCN3 397 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 ARPC5O15511 151 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 CRYBB3P26998 211 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 RPL29P47914 159 aaKnown RBP10.71□□□□□ -0.69
VPS25-201ENST00000253794 CAMLGP49069 296 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 PRR20EP86478 221 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 PRR20CP86479 221 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 PRR20DP86480 221 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 PRR20BP86481 221 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 PRR20AP86496 221 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 RAB31Q13636 194 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 OPCMLQ14982 345 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 TM4SF20Q53R12 229 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 C9orf66Q5T8R8 295 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 PXDC1Q5TGL8 231 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.69
VPS25-201ENST00000253794 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 BPIFCQ8NFQ6 507 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 MFFQ9GZY8 342 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 WFDC1Q9HC57 220 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 U3KQE9 123 aa10.71□□□□□ -0.69
VPS25-201ENST00000253794 NOTCH3Q9UM47 2321 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 YIF1AO95070 293 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 IL4P05112 153 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 FOLR2P14207 255 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 FGF7P21781 194 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 CBLN1P23435 193 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 ZNF266Q14584 549 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 USF2Q15853 346 aaPredicted RBP10.7□□□□□ -0.7
VPS25-201ENST00000253794 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 HYLS1Q96M11 299 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 C20orf24Q9BUV8 137 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 NPCDR1Q9BY65 106 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 VSIRQ9H7M9 311 aa10.7□□□□□ -0.7
VPS25-201ENST00000253794 A0A0D9SG52 128 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 TAAR5O14804 337 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 IFNA5P01569 189 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 LINC00869P0C866 280 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 IGLL1P15814 213 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 CD300CQ08708 224 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 OR2K2Q8NGT1 345 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 METTL26Q96S19 204 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 SMIM3Q9BZL3 60 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 KCNIP2Q9NS61 270 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 TECRQ9NZ01 308 aaKnown RBP10.69□□□□□ -0.7
VPS25-201ENST00000253794 SMPXQ9UHP9 88 aa10.69□□□□□ -0.7
VPS25-201ENST00000253794 SAP30O75446 220 aa10.68□□□□□ -0.7
VPS25-201ENST00000253794 HNRNPCP07910 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS25-201ENST00000253794 CXCL2P19875 107 aa10.68□□□□□ -0.7
VPS25-201ENST00000253794 NPPCP23582 126 aa10.68□□□□□ -0.7
VPS25-201ENST00000253794 GATA2P23769 480 aaPredicted RBP10.68□□□□□ -0.7
VPS25-201ENST00000253794 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
VPS25-201ENST00000253794 AP2S1P53680 142 aaPredicted RBP10.68□□□□□ -0.7
VPS25-201ENST00000253794 TIMM9Q9Y5J7 89 aa10.68□□□□□ -0.7
VPS25-201ENST00000253794 IGHV3OR16-8A0A075B7F1 116 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 A0A1W2PS18 150 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 CHEK1O14757 476 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 EDN2P20800 178 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 BMI1P35226 326 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 LYZP61626 148 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 EGFEM1PQ0D2K5 195 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 DEFB114Q30KQ6 69 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
VPS25-201ENST00000253794 STPG3Q8N7X2 389 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 CYTL1Q9NRR1 136 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 MLXQ9UH92 298 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 PFDN2Q9UHV9 154 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 RABAC1Q9UI14 185 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 PXMP4Q9Y6I8 212 aa10.67□□□□□ -0.7
VPS25-201ENST00000253794 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
VPS25-201ENST00000253794 C17orf112F2Z3M2 114 aa10.66□□□□□ -0.7
VPS25-201ENST00000253794 ZNF207O43670 478 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms