RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RPL15P61313 204 aaKnown RBP12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 ATOH7Q8N100 152 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 CTSZQ9UBR2 303 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 EPDR1Q9UM22 224 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 IZUMO1RA6ND01 250 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 AARDQ4LEZ3 155 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 IGF2-ASQ6U949 168 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 KLHDC1Q8N7A1 406 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 C5orf17Q8NAS9 161 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 ATG101Q9BSB4 218 aa12.09□□□□□ -0.47
UBE2D4-201ENST00000222402 CX3CL1P78423 397 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 TMEM155Q4W5P6 130 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 WNT10AQ9GZT5 417 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 ARL2-SNX15V9GYD0 113 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 V9GYV3 84 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 THBDP07204 575 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 TCF24Q7RTU0 167 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 BPIFA4PQ86YQ2 179 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 Q8N7P7 452 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 Q6ZN92 141 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 GRAMD2BQ96HH9 432 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 Q9H3A6 140 aa12.08□□□□□ -0.48
UBE2D4-201ENST00000222402 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 E7EUB6 86 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 MORN5Q5VZ52 161 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 NUDT10Q8NFP7 164 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 NUDT11Q96G61 164 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 GPR82Q96P67 336 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 NRN1Q9NPD7 142 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 IL4P05112 153 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 YPEL3P61236 119 aaPredicted RBP12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 DNLZQ5SXM8 178 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 FAM162BQ5T6X4 162 aa12.07□□□□□ -0.48
UBE2D4-201ENST00000222402 TIMM23O14925 209 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 NEU1Q99519 415 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 SLC25A2Q9BXI2 301 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 THYN1Q9P016 225 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 DPM3Q9P2X0 92 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 SIGLEC9Q9Y336 463 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 A8MWP6 167 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 NUPR1O60356 82 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 TCF15Q12870 199 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 IGHV3-35A0A0C4DH35 117 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 SPATA45Q537H7 98 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 LBHQ53QV2 105 aaPredicted RBP12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 UNQ6494/PRO21346Q6UXR6 183 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 MGAQ8IWI9 3026 aa12.06□□□□□ -0.48
UBE2D4-201ENST00000222402 TMEM11P17152 192 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 COMPP49747 757 aaPredicted RBP12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 LOC105371242A0A075B767 164 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 FRMD6-AS1P0C7T7 363 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 PSG1P11464 419 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 ZNF25P17030 456 aaPredicted RBP12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 KCNS1Q96KK3 526 aa12.05□□□□□ -0.48
UBE2D4-201ENST00000222402 PRSS33Q8NF86 280 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 F2Z2F3 143 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 BUB1B-PAK6H3BSN5 160 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 FAM71F2Q6NXP2 309 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 ZNF329Q86UD4 541 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 TNFRSF14Q92956 283 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 RITA1Q96K30 269 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 RPP21Q9H633 154 aaKnown RBP12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
UBE2D4-201ENST00000222402 HBBP68871 147 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 TRAV8-1A0A0A6YYK1 113 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 ZNF324O75467 553 aaPredicted RBP12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 POLR3KQ9Y2Y1 108 aaPredicted RBP12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 C1orf194Q5T5A4 169 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 LINC00311Q8N616 119 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 PRSS3P2Q8NHM4 247 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 TRGV9Q99603 122 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 CREBBPQ92793 2442 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 EXOC3-AS1Q8N2X6 119 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
UBE2D4-201ENST00000222402 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.48
UBE2D4-201ENST00000222402 CDKN1AP38936 164 aa12.02□□□□□ -0.48
UBE2D4-201ENST00000222402 PDLIM4P50479 330 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms