RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RAB31Q13636 194 aa20.83■□□□□ 0.93
CHMP4B-201ENST00000217402 ZNF266Q14584 549 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 LGALSLQ3ZCW2 172 aaPredicted RBP20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 RPL7L1Q6DKI1 246 aaKnown RBP20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 SCGB1C1Q8TD33 95 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 TMEM190Q8WZ59 177 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 GGTLC1Q9BX51 225 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 NPCDR1Q9BY65 106 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 ZFAND3Q9H8U3 227 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 VWFP04275 2813 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 IL4P05112 153 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 TMUB2Q71RG4 321 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 OR51G1Q8NGK1 321 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 ARPC5LQ9BPX5 153 aa20.82■□□□□ 0.92
CHMP4B-201ENST00000217402 ZNF207O43670 478 aaKnown RBP20.81■□□□□ 0.92
CHMP4B-201ENST00000217402 MPDU1O75352 247 aa20.81■□□□□ 0.92
CHMP4B-201ENST00000217402 REC114Q7Z4M0 266 aa20.81■□□□□ 0.92
CHMP4B-201ENST00000217402 BPIFCQ8NFQ6 507 aa20.81■□□□□ 0.92
CHMP4B-201ENST00000217402 PBDC1Q9BVG4 233 aa20.81■□□□□ 0.92
CHMP4B-201ENST00000217402 SLC45A2Q9UMX9 530 aa20.81■□□□□ 0.92
CHMP4B-201ENST00000217402 KANTRA0A1W2PQU2 76 aa20.8■□□□□ 0.92
CHMP4B-201ENST00000217402 OVOL1O14753 267 aa20.8■□□□□ 0.92
CHMP4B-201ENST00000217402 TAAR5O14804 337 aa20.8■□□□□ 0.92
CHMP4B-201ENST00000217402 LYZP61626 148 aa20.8■□□□□ 0.92
CHMP4B-201ENST00000217402 C9orf62Q8N4C0 152 aa20.8■□□□□ 0.92
CHMP4B-201ENST00000217402 RSG1Q9BU20 258 aa20.8■□□□□ 0.92
CHMP4B-201ENST00000217402 BORCS7-ASMTA0A0B4J1R7 106 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 LGALS9O00182 355 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 BCL2L11O43521 198 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 SELENOTP62341 195 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 MIC13Q5XKP0 118 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 HSD17B11Q8NBQ5 300 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 OR9G4Q8NGQ1 327 aa20.79■□□□□ 0.92
CHMP4B-201ENST00000217402 TRRAPQ9Y4A5 3859 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 BOLA2-SMG1P6H3BVE0 249 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 LINC00869P0C866 280 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 OPCMLQ14982 345 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 TM4SF20Q53R12 229 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 ZNF709Q8N972 641 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 RNF125Q96EQ8 232 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 PARD6GQ9BYG4 376 aaPredicted RBP20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 CYTL1Q9NRR1 136 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 EDN2P20800 178 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 USF2Q15853 346 aaPredicted RBP20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 STPG3Q8N7X2 389 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 UFC1Q9Y3C8 167 aa20.78■□□□□ 0.92
CHMP4B-201ENST00000217402 A8MWP6 167 aa20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 LAMTOR1Q6IAA8 161 aa20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 DAZ1Q9NQZ3 744 aaKnown RBP20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 DOK5Q9P104 306 aa20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 PEMTQ9UBM1 199 aa20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 RFNGQ9Y644 331 aa20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 PXMP4Q9Y6I8 212 aa20.77■□□□□ 0.92
CHMP4B-201ENST00000217402 WI2-2373I1.2A0A1W2PRP0 233 aa20.76■□□□□ 0.91
CHMP4B-201ENST00000217402 GINS3Q9BRX5 216 aa20.76■□□□□ 0.91
CHMP4B-201ENST00000217402 ZNF471Q9BX82 626 aaPredicted RBP20.76■□□□□ 0.91
CHMP4B-201ENST00000217402 TMEM213A2RRL7 107 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 C17orf112F2Z3M2 114 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 JTBO76095 146 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 ORM2P19652 201 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 CD33P20138 364 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 RPL29P47914 159 aaKnown RBP20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 B2MP61769 119 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 OR1B1Q8NGR6 318 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 CFDP00746 253 aaPredicted RBP20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 PRR20EP86478 221 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 PRR20CP86479 221 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 PRR20DP86480 221 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 PRR20BP86481 221 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 PRR20AP86496 221 aa20.75■□□□□ 0.91
CHMP4B-201ENST00000217402 IGHV3-49A0A0A0MS15 119 aa20.74■□□□□ 0.91
CHMP4B-201ENST00000217402 C2orf70A6NJV1 201 aa20.74■□□□□ 0.91
CHMP4B-201ENST00000217402 SLC39A9Q9NUM3 307 aa20.74■□□□□ 0.91
CHMP4B-201ENST00000217402 ATP6V0CP27449 155 aa20.73■□□□□ 0.91
CHMP4B-201ENST00000217402 METTL26Q96S19 204 aa20.73■□□□□ 0.91
CHMP4B-201ENST00000217402 SH3BGRL3Q9H299 93 aa20.73■□□□□ 0.91
CHMP4B-201ENST00000217402 KCNIP2Q9NS61 270 aa20.73■□□□□ 0.91
CHMP4B-201ENST00000217402 IGHV3OR16-13A0A075B7E8 117 aa20.72■□□□□ 0.91
CHMP4B-201ENST00000217402 IGHV3-74A0A0B4J1X5 117 aa20.72■□□□□ 0.91
CHMP4B-201ENST00000217402 IL34Q6ZMJ4 242 aa20.72■□□□□ 0.91
CHMP4B-201ENST00000217402 ELOVL1Q9BW60 279 aa20.72■□□□□ 0.91
CHMP4B-201ENST00000217402 RABAC1Q9UI14 185 aa20.72■□□□□ 0.91
CHMP4B-201ENST00000217402 K7EMT4 169 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 HNRNPCP07910 306 aaKnown RBP eCLIP20.71■□□□□ 0.917e-6■□□□□ 10.8
CHMP4B-201ENST00000217402 OR5G3P0C626 314 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 NPPCP23582 126 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 ELLP55199 621 aaPredicted RBP20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 Q6ZRG5 221 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 APOHP02749 345 aaPredicted RBP20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 CSN3P07498 182 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 FOLR2P14207 255 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 SELENOKQ9Y6D0 94 aa20.71■□□□□ 0.91
CHMP4B-201ENST00000217402 IGHV3-66A0A0C4DH42 116 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 SEC14L6B5MCN3 397 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 HYPMO75409 117 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 SAP30O75446 220 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 CBLN1P23435 193 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 FFAR4Q5NUL3 377 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 ADAMTSL5Q6ZMM2 481 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 WFDC9Q8NEX5 89 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 243.2 ms