RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 C9JCJ5 164 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 NDUFB8O95169 186 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 FABP1P07148 127 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 RPS10P46783 165 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 MFAP4P55083 255 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 C5orf56Q8N8D9 126 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 OCC1Q8TAD7 63 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 ZNF48Q96MX3 618 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 ELOVL1Q9BW60 279 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 ATP6V0E1O15342 81 aa13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 TOMM40O96008 361 aa13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 COL8A1P27658 744 aa13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 C1QL4Q86Z23 238 aa13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 HIF1ANQ9NWT6 349 aa13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 THYN1Q9P016 225 aa13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 MRPL27Q9P0M9 148 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-201ENST00000216840 A0A096LNT2 108 aa13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 SH2D7A6NKC9 451 aaPredicted RBP13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 OR2J3O76001 311 aa13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 CD99P14209 185 aa13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 TMEM219Q86XT9 240 aa13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 FAM110DQ8TAY7 271 aaPredicted RBP13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 ANKRD17O75179 2603 aaKnown RBP13.52□□□□□ -0.24
RABGGTA-201ENST00000216840 TRBV24-1A0A075B6N3 115 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 HELTA6NFD8 242 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 GNG7O60262 68 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 GP9P14770 177 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 GALR1P47211 349 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 KRTAP10-9P60411 292 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 LEMD1Q68G75 181 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 UNQ5815/PRO19632Q6UWF5 114 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 NECAP1Q8NC96 275 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 FAM210BQ96KR6 192 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 SLC25A39Q9BZJ4 359 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 C21orf62Q9NYP8 219 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 SOX21Q9Y651 276 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 LY96Q9Y6Y9 160 aa13.52□□□□□ -0.25
RABGGTA-201ENST00000216840 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■■□□□ 14.3
RABGGTA-201ENST00000216840 TRAV20A0A0B4J274 112 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 LINC01548A6NM66 108 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 HNF1AP20823 631 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 ECSCRQ19T08 205 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 TMUB1Q9BVT8 246 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 FBN2P35556 2912 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 CSMD1Q96PZ7 3565 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 MYCNOSP40205 109 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 YPEL3P61236 119 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 KLK9Q2XQG4 91 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 ZNF491Q8N8L2 437 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 OR5B12Q96R08 314 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 FBXL7Q9UJT9 491 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
RABGGTA-201ENST00000216840 WI2-2373I1.2A0A1W2PRP0 233 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 K7EN84 100 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 AVPP01185 164 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 HIST1H1BP16401 226 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 Q56UQ5 140 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 PYGO2Q9BRQ0 406 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 SAV1Q9H4B6 383 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 BIN3Q9NQY0 253 aa13.5□□□□□ -0.25
RABGGTA-201ENST00000216840 MDFIC2A0A1B0GVS7 189 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 IGHV3-23P01764 117 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 GATA3P23771 443 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 CENPWQ5EE01 88 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 BLNKQ8WV28 456 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 RNF125Q96EQ8 232 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 CELSR2Q9HCU4 2923 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 PPP1R2P9O14990 202 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 AMY1AP04745 511 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 S100PP25815 95 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 GNG4P50150 75 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 RANP62826 216 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 TEX38Q6PEX7 206 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
RABGGTA-201ENST00000216840 G3V318 75 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 IL4P05112 153 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 FCGR2BP31994 310 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 SRP14P37108 136 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 ZNF600Q6ZNG1 722 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 TMEM68Q96MH6 324 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 SHANK2-AS3Q9BTD1 123 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 H3BRN7 92 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 VN1R17PQ8TDU5 208 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 IGF2BP2-AS1Q96M15 143 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 TXN2Q99757 166 aa13.48□□□□□ -0.25
RABGGTA-201ENST00000216840 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
RABGGTA-201ENST00000216840 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
RABGGTA-201ENST00000216840 POLQO75417 2590 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms