RNA–Protein interactions for RNA: ENST00000592599.5

SAFB2-211, Transcript of scaffold attachment factor B2, human

TSL 2

Gene SAFB2, Length 2,260 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-211	ENST00000592599	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599		A6NDX4	124 aa		10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	HOXA3	O43365	443 aa	Predicted RBP	10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	SRP14	P37108	136 aa	Known RBP	10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	ELL	P55199	621 aa	Predicted RBP	10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	HAGH	Q16775	308 aa		10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	TREML4	Q6UXN2	200 aa		10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	DPPA3	Q6W0C5	159 aa		10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	VSIR	Q9H7M9	311 aa		10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.86	□□□□□ -0.67
SAFB2-211	ENST00000592599	SETD2	Q9BYW2	2564 aa	Predicted RBP	10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599		H3BQ15	152 aa		10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	SCAF4	O95104	1147 aa	Known RBP	10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	HLA-DRB1	P01911	266 aa		10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	HSPB1	P04792	205 aa	Known RBP	10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	IER3	P46695	156 aa		10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	FABP9	Q0Z7S8	132 aa		10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	WDR73	Q6P4I2	378 aa		10.85	□□□□□ -0.67
SAFB2-211	ENST00000592599	OR2C1	O95371	312 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	AKR1C8P	Q5T2L2	129 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	NOL4L	Q96MY1	436 aa	Predicted RBP	10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	GSX1	Q9H4S2	264 aa	Predicted RBP	10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599		A0A087WWC5	75 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	TRAV1-1	A0A0B4J248	108 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	CD5L	O43866	347 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	GATA2	P23769	480 aa	Predicted RBP	10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	GAMT	Q14353	236 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	SLC16A13	Q7RTY0	426 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	SIGLECL1	Q8N7X8	197 aa		10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	F11R	Q9Y624	299 aa	Known RBP	10.84	□□□□□ -0.67
SAFB2-211	ENST00000592599	IGKV1OR2-108	A0A075B7D4	117 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	HBE1	P02100	147 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	SUB1	P53999	127 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	UNQ5815/PRO19632	Q6UWF5	114 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	CYB561D1	Q8N8Q1	229 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	NPCDR1	Q9BY65	106 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	INS-IGF2	F8WCM5	200 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	AP4M1	O00189	453 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	LY86	O95711	162 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	IGHV3-23	P01764	117 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	CD69	Q07108	199 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	ATP6V1F	Q16864	119 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	GCSAML	Q5JQS6	135 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	MGST2	Q99735	147 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	TCEAL7	Q9BRU2	100 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	ZNF355P	Q9NSJ1	428 aa		10.83	□□□□□ -0.68
SAFB2-211	ENST00000592599	MT-CO2	P00403	227 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	DLK1	P80370	383 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	VWC2	Q2TAL6	325 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	KHDC3L	Q587J8	217 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599		Q6YL49	198 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	OR10G4	Q8NGN3	311 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	OR1P1	Q8NH06	330 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	NPIPB3	Q92617	1050 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	LOC102723971	A0A1B0GUV8	181 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	HMGB3	O15347	200 aa	Known RBP	10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	LY6G6D	O95868	133 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	S100A9	P06702	114 aa	Known RBP	10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	MIC13	Q5XKP0	118 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	ACSM6	Q6P461	480 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	MS4A10	Q96PG2	267 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	NPVF	Q9HCQ7	196 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	PITPNC1	Q9UKF7	332 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	WDR83OS	Q9Y284	106 aa		10.82	□□□□□ -0.68
SAFB2-211	ENST00000592599	CLN5	O75503	358 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	OR2J3	O76001	311 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	RND2	P52198	227 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	SLC35E3	Q7Z769	313 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	MRPL41	Q8IXM3	137 aa	Known RBP	10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	SGMS2	Q8NHU3	365 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	ZNF727	A8MUV8	499 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	TAGLN2	P37802	199 aa	Known RBP	10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	RAB2A	P61019	212 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	C9orf139	Q6ZV77	190 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	TVP23C	Q96ET8	276 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	FANCD2OS	Q96PS1	177 aa		10.81	□□□□□ -0.68
SAFB2-211	ENST00000592599	NSD1	Q96L73	2696 aa	Predicted RBP	10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	CYSRT1	A8MQ03	144 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	SOX15	O60248	233 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	MDK	P21741	143 aa	Predicted RBP	10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	ZNF90	Q03938	601 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	ELOB	Q15370	118 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	FFAR4	Q5NUL3	377 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	TEPP	Q6URK8	271 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	ZNF709	Q8N972	641 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	ZNF114	Q8NC26	417 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599		Q8WTZ3	238 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	SLC35E1	Q96K37	410 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	RPRM	Q9NS64	109 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	F8	P00451	2351 aa		10.8	□□□□□ -0.68
SAFB2-211	ENST00000592599	CXorf65	A6NEN9	183 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	PF4V1	P10720	104 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	OR10J1	P30954	320 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	ZNF726P1	Q15940	193 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	FAM90A2P	Q658T7	463 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	LCNL1	Q6ZST4	164 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	SSX7	Q7RTT5	188 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	MBD3L1	Q8WWY6	194 aa		10.79	□□□□□ -0.68
SAFB2-211	ENST00000592599	NIPSNAP3B	Q9BS92	247 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms