RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 IFNA21P01568 189 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 AMBPP02760 352 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 C4BPBP20851 252 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 OR10J1P30954 320 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 C12orf74Q32Q52 190 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 AP3S1Q92572 193 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 U3KQE9 123 aa12.92□□□□□ -0.34
MKS1-209ENST00000580127 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 SMIM9A6NGZ8 99 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 HPGDSO60760 199 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 TNFAIP8O95379 198 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 SPART-AS1P0CW21 52 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 UCP1P25874 307 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 NUP62P37198 522 aaPredicted RBP12.91□□□□□ -0.34
MKS1-209ENST00000580127 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 SP6Q3SY56 376 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 LHFPL1Q86WI0 220 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 MRPL36Q9P0J6 103 aaKnown RBP12.91□□□□□ -0.34
MKS1-209ENST00000580127 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 KLK11Q9UBX7 282 aa12.91□□□□□ -0.34
MKS1-209ENST00000580127 TEX13DA0A0J9YY54 714 aaPredicted RBP12.9□□□□□ -0.34
MKS1-209ENST00000580127 CEBPZOSA8MTT3 80 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 IFNA10P01566 189 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 CD3DP04234 171 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 RD3LP0DJH9 198 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 RND2P52198 227 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 DHODHQ02127 395 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 C2orf83Q53S99 150 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 PRSS54Q6PEW0 395 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 FAM210BQ96KR6 192 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 ABHD1Q96SE0 405 aa12.9□□□□□ -0.34
MKS1-209ENST00000580127 C14orf166Q9Y224 244 aaKnown RBP12.9□□□□□ -0.34
MKS1-209ENST00000580127 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 FAM90A26D6RGX4 464 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 CDS2O95674 445 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 IGLC1P0CG04 106 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 TAS2R19P59542 299 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 SCGB2B2Q4G0G5 96 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 SIGLEC15Q6ZMC9 328 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 TMEM222Q9H0R3 208 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 MTFP1Q9UDX5 166 aa12.89□□□□□ -0.35
MKS1-209ENST00000580127 H3BMM0 161 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 RAB3DO95716 219 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 IL4P05112 153 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 ID1P41134 155 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 AARDQ4LEZ3 155 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 RNASE12Q5GAN4 147 aaKnown RBP12.88□□□□□ -0.35
MKS1-209ENST00000580127 SOHLH1Q5JUK2 328 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 TMEM229BQ8NBD8 167 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 SLC24A4Q8NFF2 622 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 OR13C8Q8NGS7 320 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 OR52I2Q8NH67 350 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
MKS1-209ENST00000580127 NEU1Q99519 415 aa12.88□□□□□ -0.35
MKS1-209ENST00000580127 NKX2-1P43699 371 aaPredicted RBP12.87□□□□□ -0.35
MKS1-209ENST00000580127 VBP1P61758 197 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 NCS1P62166 190 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 MEF2DQ14814 521 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 Q6ZRM9 215 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 UBE2DNLQ8IWF7 75 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 CELA1Q9UNI1 258 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 HERC2O95714 4834 aa12.87□□□□□ -0.35
MKS1-209ENST00000580127 M0R2N4 97 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 BUB3O43684 328 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 TOMM40O96008 361 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 FABP1P07148 127 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 ACY3Q96HD9 319 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 EXTL2Q9UBQ6 330 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 CACNG5Q9UF02 275 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 DNAH10Q8IVF4 4471 aa12.86□□□□□ -0.35
MKS1-209ENST00000580127 CD74P04233 296 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 OR5AC1P0C628 307 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 EMP1P54849 157 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 SSBP1Q04837 148 aaKnown RBP12.85□□□□□ -0.35
MKS1-209ENST00000580127 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
MKS1-209ENST00000580127 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 GLYATL2Q8WU03 294 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 U3KQ87 197 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
MKS1-209ENST00000580127 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
MKS1-209ENST00000580127 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
MKS1-209ENST00000580127 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
MKS1-209ENST00000580127 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
MKS1-209ENST00000580127 KLF9Q13886 244 aaPredicted RBP12.84□□□□□ -0.35
MKS1-209ENST00000580127 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
MKS1-209ENST00000580127 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
MKS1-209ENST00000580127 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms