RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DEFB109BQ30KR1 87 aa14.12□□□□□ -0.15
SCARF1-205ENST00000571272 EBLN2Q6P2I7 272 aa14.12□□□□□ -0.15
SCARF1-205ENST00000571272 OSR1Q8TAX0 266 aaPredicted RBP14.12□□□□□ -0.15
SCARF1-205ENST00000571272 ZNF714Q96N38 554 aa14.12□□□□□ -0.15
SCARF1-205ENST00000571272 ZNF841Q6ZN19 808 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 FLYWCH2Q96CP2 140 aaKnown RBP14.11□□□□□ -0.15
SCARF1-205ENST00000571272 GRAMD2BQ96HH9 432 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 MRPL27Q9P0M9 148 aaKnown RBP14.11□□□□□ -0.15
SCARF1-205ENST00000571272 MGAQ8IWI9 3026 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 MBD3L4A6NDZ8 208 aaPredicted RBP14.11□□□□□ -0.15
SCARF1-205ENST00000571272 MBD3L3A6NE82 208 aaPredicted RBP14.11□□□□□ -0.15
SCARF1-205ENST00000571272 MBD3L5A6NJ08 208 aaPredicted RBP14.11□□□□□ -0.15
SCARF1-205ENST00000571272 VWC2LB2RUY7 222 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 IGFL2Q6UWQ7 119 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 ZNF833PQ6ZTB9 187 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 KLHDC1Q8N7A1 406 aa14.11□□□□□ -0.15
SCARF1-205ENST00000571272 MBD3L2Q8NHZ7 208 aaPredicted RBP14.11□□□□□ -0.15
SCARF1-205ENST00000571272 PCNX1Q96RV3 2341 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 FAM181BA6NEQ2 426 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 TM4SF5O14894 197 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 CD24P25063 80 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 LINC00305Q7Z4B0 112 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 RBMXL3Q8N7X1 1067 aaKnown RBP14.1□□□□□ -0.15
SCARF1-205ENST00000571272 OR2D3Q8NGH3 330 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 FXYD5Q96DB9 178 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 ZNF430Q9H8G1 570 aaPredicted RBP14.1□□□□□ -0.15
SCARF1-205ENST00000571272 LINC00574Q9H8X3 128 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 TNFRSF19Q9NS68 423 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 CGB1A6NKQ9 187 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 CRYABP02511 175 aaKnown RBP14.1□□□□□ -0.15
SCARF1-205ENST00000571272 ORM2P19652 201 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 FAM27E3Q08E93 113 aa14.1□□□□□ -0.15
SCARF1-205ENST00000571272 WIPF2Q8TF74 440 aaPredicted RBP14.1□□□□□ -0.15
SCARF1-205ENST00000571272 IGKV1D-37A0A075B6S9 117 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 MOSP00540 346 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 TSPOP30536 169 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 RUSC1-AS1Q66K80 236 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 FAM231DQ6ZW35 169 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 TCF24Q7RTU0 167 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 DEFB123Q8N688 67 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 KIR3DL3Q8N743 410 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 OR1L4Q8NGR5 311 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 ALKBH7Q9BT30 221 aaPredicted RBP14.09□□□□□ -0.15
SCARF1-205ENST00000571272 TCRBV4S1A1TA0A5B7 111 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 UBE2G1P62253 170 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 SAP30LQ9HAJ7 183 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 LINC00312Q9Y6C7 94 aa14.09□□□□□ -0.15
SCARF1-205ENST00000571272 SH2D7A6NKC9 451 aaPredicted RBP14.08□□□□□ -0.15
SCARF1-205ENST00000571272 H3BTX0 84 aa14.08□□□□□ -0.15
SCARF1-205ENST00000571272 M0QZ24 198 aa14.08□□□□□ -0.15
SCARF1-205ENST00000571272 SLC25A5P05141 298 aaKnown RBP14.08□□□□□ -0.15
SCARF1-205ENST00000571272 BPIFB3P59826 476 aa14.08□□□□□ -0.15
SCARF1-205ENST00000571272 PMCHL1Q16048 86 aa14.08□□□□□ -0.15
SCARF1-205ENST00000571272 CLEC5AQ9NY25 188 aa14.08□□□□□ -0.15
SCARF1-205ENST00000571272 APELAP0DMC3 54 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 TNFSF4P23510 183 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 OR5AN1Q8NGI8 311 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 FAM215AQ9Y5M1 114 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 TPRP12270 2363 aaKnown RBP14.08□□□□□ -0.16
SCARF1-205ENST00000571272 PGPA6NDG6 321 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 HIST1H1EP10412 219 aaKnown RBP14.08□□□□□ -0.16
SCARF1-205ENST00000571272 SFTPCP11686 197 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 FOXA3P55318 350 aaPredicted RBP14.08□□□□□ -0.16
SCARF1-205ENST00000571272 RASL11AQ6T310 242 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 OR1B1Q8NGR6 318 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 OR10X1Q8NGY0 326 aa14.08□□□□□ -0.16
SCARF1-205ENST00000571272 IGHV3-21A0A0B4J1V1 117 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 FSTL3O95633 263 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 UNQ5815/PRO19632Q6UWF5 114 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 PDPNQ86YL7 162 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 TPSG1Q9NRR2 321 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 TMEM177Q53S58 311 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 HCP5Q6MZN7 132 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 SPATA12Q7Z6I5 190 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 H1FXQ92522 213 aaKnown RBP14.07□□□□□ -0.16
SCARF1-205ENST00000571272 LOXL4Q96JB6 756 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 GAL3ST2Q9H3Q3 398 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 TP73-AS1Q9UF72 201 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 EPDR1Q9UM22 224 aa14.07□□□□□ -0.16
SCARF1-205ENST00000571272 IGLL1P15814 213 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 LINC00322Q6ZN03 302 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-205ENST00000571272 OR4C13Q8NGP0 309 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 C7orf69Q9H7B7 122 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 GVINP1Q7Z2Y8 2422 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 DMXL2Q8TDJ6 3036 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 M0R296 226 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 SLC25A17O43808 307 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 FCN3O75636 299 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 C21orf62-AS1Q17RA5 79 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 TMEM200BQ69YZ2 307 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 OR8B3Q8NGG8 313 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 TMEM167AQ8TBQ9 72 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 RITA1Q96K30 269 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 OR8B2Q96RD0 313 aa14.06□□□□□ -0.16
SCARF1-205ENST00000571272 TRAV9-2A0A087WT02 112 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 C2orf70A6NJV1 201 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 KLF5Q13887 457 aaPredicted RBP14.05□□□□□ -0.16
SCARF1-205ENST00000571272 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
SCARF1-205ENST00000571272 SPAARA0A1B0GVQ0 90 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms